J Tomasi, B Mennucci, R Cammi - Chemical reviews, 2005 - ACS Publications
This review on continuum solvation models has been preceded in Chemical Reviews by others addressing the same subject. They are due to Tomasi and Persico1 (published in …
Essentials of Computational Chemistry provides a balanced introduction to this dynamic subject. Suitable for both experimentalists and theorists, a wide range of samples and …
Advances in theory and algorithms for electronic structure calculations must be incorporated into program packages to enable them to become routinely used by the broader chemical …
JT Vivian, PR Callis - Biophysical journal, 2001 - cell.com
Tryptophan fluorescence wavelength is widely used as a tool to monitor changes in proteins and to make inferences regarding local structure and dynamics. We have predicted the …
V Barone, M Cossi, J Tomasi - Journal of Computational …, 1998 - Wiley Online Library
A new implementation of analytical gradients for the polarizable continuum model is presented, which allows Hartree‐Fock and density functional calculations taking into …
The present review is concerned with continuum and other implicit models of solvation effects. We will concentrate on the elements required to make such models successful and …
A Warshel, PK Sharma, M Kato, Y Xiang, H Liu… - Chemical …, 2006 - ACS Publications
Enzymatic reactions play a fundamentally important role in controlling and performing most life processes. 1-3 Thus, understanding how enzymes work has both fundamental and …
The issues of electronic polarizability in molecular dynamics simulations are discussed. We argue that the charges of ionized groups in proteins, and charges of ions in conventional …
AD MacKerell Jr - Journal of computational chemistry, 2004 - Wiley Online Library
Empirical force field‐based studies of biological macromolecules are becoming a common tool for investigating their structure–activity relationships at an atomic level of detail. Such …