[HTML][HTML] DFTB+, a software package for efficient approximate density functional theory based atomistic simulations

B Hourahine, B Aradi, V Blum, F Bonafe… - The Journal of …, 2020 - pubs.aip.org
DFTB+ is a versatile community developed open source software package offering fast and
efficient methods for carrying out atomistic quantum mechanical simulations. By …

Density-functional tight-binding for beginners

P Koskinen, V Mäkinen - Computational Materials Science, 2009 - Elsevier
This article is a pedagogical introduction to density-functional tight-binding (DFTB) method.
We derive it from the density-functional theory, give the details behind the tight-binding …

Density-functional tight-binding approach for metal clusters, nanoparticles, surfaces and bulk: application to silver and gold

J Cuny, N Tarrat, F Spiegelman… - Journal of Physics …, 2018 - iopscience.iop.org
Density-functional based tight-binding (DFTB) is an efficient quantum mechanical method
that can describe a variety of systems, going from organic and inorganic compounds to …

Bioengineering a single-protein junction

MP Ruiz, AC Aragonès, N Camarero… - Journal of the …, 2017 - ACS Publications
Bioelectronics moves toward designing nanoscale electronic platforms that allow in vivo
determinations. Such devices require interfacing complex biomolecular moieties as the …

[HTML][HTML] Surface hopping with a manifold of electronic states. III. Transients, broadening, and the Marcus picture

W Dou, A Nitzan, JE Subotnik - The Journal of chemical physics, 2015 - pubs.aip.org
In a previous paper [Dou et al., J. Chem. Phys. 142, 084110 (2015)], we have introduced a
surface hopping (SH) approach to deal with the Anderson-Holstein model. Here, we address …

Switching behavior of carbon chains bridging graphene nanoribbons: effects of uniaxial strain

B Akdim, R Pachter - Acs Nano, 2011 - ACS Publications
Recently, several experiments demonstrated the stability of chain-like carbon nanowires
bridged between graphene nanoribbons, paving the way for potential applications in …

Nonadiabatic dynamics near metal surface with periodic drivings: A Floquet surface hopping algorithm

Y Wang, W Dou - The Journal of Chemical Physics, 2023 - pubs.aip.org
We develop a Floquet surface hopping approach to deal with nonadiabatic dynamics of
molecules near metal surfaces subjected to time-periodic drivings from strong light–matter …

Adsorption Site Preference Determined by Triangular Topology: Application of the Method of Moments to Transition Metal Surfaces

Y Tsuji, K Yoshizawa - The Journal of Physical Chemistry C, 2022 - ACS Publications
The adsorption sites of the top and hollow on the close-packed surfaces of transition metals
are well known. In this paper, which site is more preferred for the adsorption of atoms and …

Ferrocene-Based Nanoelectronics: Regioselective Syntheses and Electrochemical Characterization of α-Monothiol and α, ω-Dithiol, Phenylethynyl-Conjugated, 2, 5 …

C Engtrakul, LR Sita - Organometallics, 2008 - ACS Publications
Regiospecific synthetic methods have been developed for the assembly of unsymmetric
conjugated molecular frameworks containing 2, 5-diethynylpyridyl-and 2, 5 …

Efficient ab initio method for inelastic transport in nanoscale devices: Analysis of inelastic electron tunneling spectroscopy

H Nakamura, K Yamashita, AR Rocha, S Sanvito - Physical Review B …, 2008 - APS
We describe the ab initio nonequilibrium Green's function method for electron-transport
calculations in nanoscale devices based on the “efficient molecular-orbital approach.” This …