Utilizing graph machine learning within drug discovery and development

T Gaudelet, B Day, AR Jamasb, J Soman… - Briefings in …, 2021 - academic.oup.com
Graph machine learning (GML) is receiving growing interest within the pharmaceutical and
biotechnology industries for its ability to model biomolecular structures, the functional …

In silico analysis of epitope-based vaccine candidate against tuberculosis using reverse vaccinology

S Bibi, I Ullah, B Zhu, M Adnan, R Liaqat, WB Kong… - Scientific reports, 2021 - nature.com
Tuberculosis (TB) kills more individuals in the world than any other disease, and a threat
made direr by the coverage of drug-resistant strains of Mycobacterium tuberculosis (Mtb) …

Management of Mycobacterium avium complex and Mycobacterium abscessus pulmonary disease: therapeutic advances and emerging treatments

K Kumar, CL Daley, DE Griffith… - European Respiratory …, 2022 - Eur Respiratory Soc
Nontuberculous mycobacterial pulmonary disease (NTM-PD) remains a challenging
condition to diagnose and treat effectively. Treatment of NTM-PD is prolonged, frequently …

Mycobacterium abscessus pathogenesis identified by phenogenomic analyses

L Boeck, S Burbaud, M Skwark, WH Pearson… - Nature …, 2022 - nature.com
The medical and scientific response to emerging and established pathogens is often
severely hampered by ignorance of the genetic determinants of virulence, drug resistance …

SARS-CoV-2 3D database: understanding the coronavirus proteome and evaluating possible drug targets

AF Alsulami, SE Thomas, AR Jamasb… - Briefings in …, 2021 - academic.oup.com
The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is a rapidly growing
infectious disease, widely spread with high mortality rates. Since the release of the SARS …

Computational approaches in epitope design using DNA binding proteins as vaccine candidate in Mycobacterium tuberculosis

N Singhvi, Y Singh, P Shukla - Infection, Genetics and Evolution, 2020 - Elsevier
Mycobacterium tuberculosis (Mtb) is a successful pathogen in the history of mankind. A high
rate of mortality and morbidity raises the need for vaccine development. Mechanism of …

Genomics, computational biology and drug discovery for mycobacterial infections: fighting the emergence of resistance

A Munir, SC Vedithi, AK Chaplin, TL Blundell - Frontiers in genetics, 2020 - frontiersin.org
Tuberculosis (TB) and leprosy are mycobacterial infections caused by Mycobacterium
tuberculosis and Mycobacterium leprae respectively. These diseases continue to be …

Enhancing tuberculosis vaccine development: a deconvolution neural network approach for multi-epitope prediction

AS Mubarak, ZS Ameen, AS Hassan, DU Ozsahin - Scientific Reports, 2024 - nature.com
Tuberculosis (TB) a disease caused by Mycobacterium tuberculosis (Mtb) poses a
significant threat to human life, and current BCG vaccinations only provide sporadic …

Emerging opportunities of exploiting mycobacterial electron transport chain pathway for drug-resistant tuberculosis drug discovery

KK Roy, MA Wani - Expert Opinion on Drug Discovery, 2020 - Taylor & Francis
Introduction: Tuberculosis (TB) is a leading infectious disease worldwide whose
chemotherapy is challenged by the continued rise of drug resistance. This epidemic urges …

Mycobacterium abscessus: insights from a bioinformatic perspective

S Sur, T Patra, M Karmakar… - Critical Reviews in …, 2023 - Taylor & Francis
Mycobacterium abscessus is a nontuberculous mycobacterium, associated with broncho-
pulmonary infections in individuals suffering from cystic fibrosis, bronchiectasis, and …