Critical evaluation of CNA estimators for DNA data using matching confidence masks and WGS technology

JU Muñoz-Minjares, YS Shmaliy, TG Popova - … Signal Processing and …, 2021 - Elsevier
A big number of different estimators have been proposed during decades to detect the Copy
Number Alterations (CNA) in Deoxyribonucleic Acid (DNA) structures and indicate various …

Improving estimates of the breakpoints in genome copy number alteration profiles with confidence masks

JM Minjares, YS Shmaliy - Biomedical Signal Processing and Control, 2017 - Elsevier
Chromosomal structural changes in human body known as copy number alterations (CNAs)
are often associated with disease such as cancer. Therefore, accurate estimation of the …

Jitter representation in SCNA breakpoints using asymmetric exponential power distribution

J Munoz-Minjares, YS Shmaliy… - 2017 14th …, 2017 - ieeexplore.ieee.org
Jitter is inherent to the breakpoints of measured genome somatic copy number alterations
(SCNAs). Therefore, an analysis of jitter is required to reduce errors in the SCNA estimation …

[PDF][PDF] The role of optimal detection of cnas and error analysis using next generation sequencing

J Munoz-Minjares, YS Shmaliy - Next Generat Sequenc & Applic, 2016 - academia.edu
These characteristics have brought revolutionary advances to genetic field and resulted in
the development of a wide variety of methods, which allowed researchers to ask virtually any …

Accurate jitter computation in CNA breakpoints using hybrid confidence masks with applications to SNP array probing

J Munoz-Minjares, YS Shmaliy… - IEEE …, 2017 - ieeexplore.ieee.org
Chromosomal structural changes known as copy number alterations-aberrations (CNAs)
result in gains or losses in copies of deoxyribonucleic acid sections, which are typically …

Improving approximation of jitter probability in the breakpoints of simulated copy number alterations

J Munoz-Minjares, YS Shmaliy… - 2016 13th …, 2016 - ieeexplore.ieee.org
We analyze and approximate the jitter distribution function in the breakpoints of the
measured genome copy number alterations (CNAs). The CNAs measured using the high …

Jitter Approximation and Confidence Masks in Simulated SCNA Using AEP Distribution

JU Muñoz–Minjares, YS Shmaliy… - … Conference on Artificial …, 2018 - Springer
Jitter is inherent to the breakpoints of measured genome somatic copy number alterations
(SCNAs). Therefore, an analysis of jitter is required to reduce errors in the SCNA estimation …

Approximation of Jitter probability in the breakpoints using AEP distribution and confidence masks of SCNA

J Munoz-Minjares, YS Shmaliy… - … Autumn Meeting on …, 2017 - ieeexplore.ieee.org
Jitter is inherent to the breakpoints of measured genome somatic copy number alterations
(SCNAs). Therefore, an analysis of jitter is required to reduce errors in the SCNA estimation …

Enhancing Estimates of Breakpoints in Genome Copy Number Alteration using Confidence Masks

J Muñoz‐Minjares, Y Shmaliy… - Advanced Biosignal …, 2016 - books.google.com
Chromosomal structural changes in human body known as copy number alteration (CNA)
are often associated with diseases, such as various forms of cancer. Therefore, accurate …