Cre recombinase and other tyrosine recombinases

G Meinke, A Bohm, J Hauber, MT Pisabarro… - Chemical …, 2016 - ACS Publications
Tyrosine-type site-specific recombinases (T-SSRs) have opened new avenues for the
predictable modification of genomes as they enable precise genome editing in heterologous …

Site-specific recombinases: molecular machines for the Genetic Revolution

FJ Olorunniji, SJ Rosser, WM Stark - Biochemical Journal, 2016 - portlandpress.com
The fields of molecular genetics, biotechnology and synthetic biology are demanding ever
more sophisticated molecular tools for programmed precise modification of cell genomic …

Modularity and diversity of target selectors in Tn7 transposons

G Faure, M Saito, S Benler, I Peng, YI Wolf, J Strecker… - Molecular cell, 2023 - cell.com
To spread, transposons must integrate into target sites without disruption of essential genes
while avoiding host defense systems. Tn7-like transposons employ multiple mechanisms for …

Structural and functional characterization of MrpR, the master repressor of the Bacillus subtilis prophage SPβ

K Kohm, E Jalomo-Khayrova, A Krüger… - Nucleic Acids …, 2023 - academic.oup.com
Prophages control their lifestyle to either be maintained within the host genome or enter the
lytic cycle. Bacillus subtilis contains the SPβ prophage whose lysogenic state depends on …

Sequence analysis of tyrosine recombinases allows annotation of mobile genetic elements in prokaryotic genomes

G Smyshlyaev, A Bateman, O Barabas - Molecular systems biology, 2021 - embopress.org
Mobile genetic elements (MGEs) sequester and mobilize antibiotic resistance genes across
bacterial genomes. Efficient and reliable identification of such elements is necessary to …

[HTML][HTML] The arbitrium system controls prophage induction

A Brady, N Quiles-Puchalt, FG Del Sol… - Current Biology, 2021 - cell.com
Some Bacillus-infecting bacteriophages use a peptide-based communication system,
termed arbitrium, to coordinate the lysis-lysogeny decision. In this system, the phage …

Centromere structure and function

K Bloom, V Costanzo - Centromeres and Kinetochores: Discovering the …, 2017 - Springer
The centromere is the genetic locus that specifies the site of kinetochore assembly, where
the chromosome will attach to the kinetochore microtubule. The pericentromere is the …

Transposase-DNA complex structures reveal mechanisms for conjugative transposition of antibiotic resistance

A Rubio-Cosials, EC Schulz, L Lambertsen… - Cell, 2018 - cell.com
Conjugative transposition drives the emergence of multidrug resistance in diverse bacterial
pathogens, yet the mechanisms are poorly characterized. The Tn1549 conjugative …

Functional characterization of Microplitis demolitor bracovirus genes that encode nucleocapsid components

A Lorenzi, MJ Arvin, GR Burke, MR Strand - Journal of Virology, 2023 - Am Soc Microbiol
Bracoviruses (BVs) are endogenized nudiviruses in parasitoid wasps of the microgastroid
complex (order Hymenoptera: Family Braconidae). BVs produce replication-defective virions …

Prophage genomics reveals patterns in phage genome organization and replication

HS Kang, K McNair, DA Cuevas, BA Bailey, AM Segall… - BioRxiv, 2017 - biorxiv.org
Temperate phage genomes are highly variable mosaic collections of genes that infect a
bacterial host, integrate into the host's genome or replicate as low copy number plasmids …