Clinical epigenetics: seizing opportunities for translation

M Berdasco, M Esteller - Nature Reviews Genetics, 2019 - nature.com
Biomarker discovery and validation are necessary for improving the prediction of clinical
outcomes and patient monitoring. Despite considerable interest in biomarker discovery and …

Genetics of chronic obstructive pulmonary disease: understanding the pathobiology and heterogeneity of a complex disorder

MH Cho, BD Hobbs, EK Silverman - The Lancet Respiratory …, 2022 - thelancet.com
Chronic obstructive pulmonary disease (COPD) is a deadly and highly morbid disease.
Susceptibility to and heterogeneity of COPD are incompletely explained by environmental …

[HTML][HTML] Multiscale analysis of independent Alzheimer's cohorts finds disruption of molecular, genetic, and clinical networks by human herpesvirus

B Readhead, JV Haure-Mirande, CC Funk… - Neuron, 2018 - cell.com
Investigators have long suspected that pathogenic microbes might contribute to the onset
and progression of Alzheimer's disease (AD) although definitive evidence has not been …

Functional variants in the LRRK2 gene confer shared effects on risk for Crohn's disease and Parkinson's disease

KY Hui, H Fernandez-Hernandez, J Hu… - Science translational …, 2018 - science.org
Crohn's disease (CD), a form of inflammatory bowel disease, has a higher prevalence in
Ashkenazi Jewish than in non-Jewish European populations. To define the role of …

DGCA: a comprehensive R package for differential gene correlation analysis

AT McKenzie, I Katsyv, WM Song, M Wang… - BMC systems …, 2016 - Springer
Background Dissecting the regulatory relationships between genes is a critical step towards
building accurate predictive models of biological systems. A powerful approach towards this …

Epigenetics and pulmonary diseases in the horizon of precision medicine: a review

G Benincasa, DL DeMeo, K Glass… - European …, 2021 - Eur Respiratory Soc
Epigenetic mechanisms represent potential molecular routes which could bridge the gap
between genetic background and environmental risk factors contributing to the …

Chromatin accessibility landscape and regulatory network of high-altitude hypoxia adaptation

J Xin, H Zhang, Y He, Z Duren, C Bai, L Chen… - Nature …, 2020 - nature.com
High-altitude adaptation of Tibetans represents a remarkable case of natural selection
during recent human evolution. Previous genome-wide scans found many non-coding …

Using omics approaches to understand pulmonary diseases

M Kan, M Shumyatcher, BE Himes - Respiratory research, 2017 - Springer
Omics approaches are high-throughput unbiased technologies that provide snapshots of
various aspects of biological systems and include: 1) genomics, the measure of DNA …

An integrative multiomic network model links lipid metabolism to glucose regulation in coronary artery disease

AT Cohain, WT Barrington, DM Jordan… - Nature …, 2021 - nature.com
Elevated plasma cholesterol and type 2 diabetes (T2D) are associated with coronary artery
disease (CAD). Individuals treated with cholesterol-lowering statins have increased T2D …

[HTML][HTML] Refining cancer management using integrated liquid biopsy

J Qiu, J Xu, K Zhang, W Gu, L Nie, G Wang, Y Luo - Theranostics, 2020 - ncbi.nlm.nih.gov
Liquid biopsy has emerged in the last ten years as an appealing noninvasive strategy to
support early cancer diagnosis and follow-up interventions. However, conventional liquid …