All tangled up: how cells direct, manage and exploit topoisomerase function

SM Vos, EM Tretter, BH Schmidt… - Nature reviews Molecular …, 2011 - nature.com
Topoisomerases are complex molecular machines that modulate DNA topology to maintain
chromosome superstructure and integrity. Although capable of stand-alone activity in vitro …

DNA topoisomerases

NG Bush, K Evans-Roberts, A Maxwell - EcoSal Plus, 2015 - Am Soc Microbiol
DNA topoisomerases are enzymes that control the topology of DNA in all cells. There are
two types, I and II, classified according to whether they make transient single-or double …

DNA topoisomerases: harnessing and constraining energy to govern chromosome topology

AJ Schoeffler, JM Berger - Quarterly reviews of biophysics, 2008 - cambridge.org
DNA topoisomerases are a diverse set of essential enzymes responsible for maintaining
chromosomes in an appropriate topological state. Although they vary considerably in …

Double-strand break repair in bacteria: a view from Bacillus subtilis

S Ayora, B Carrasco, PP Cárdenas… - FEMS microbiology …, 2011 - academic.oup.com
In all living organisms, the response to double-strand breaks (DSBs) is critical for the
maintenance of chromosome integrity. Homologous recombination (HR), which utilizes a …

DNA topology and topoisomerases: teaching a “knotty” subject

JE Deweese, MA Osheroff… - … and Molecular Biology …, 2009 - Wiley Online Library
DNA is essentially an extremely long double‐stranded rope in which the two strands are
wound about one another. As a result, topological properties of the genetic material …

Molecular mechanisms of the whole DNA repair system: a comparison of bacterial and eukaryotic systems

R Morita, S Nakane, A Shimada, M Inoue… - Journal of nucleic …, 2010 - Wiley Online Library
DNA is subjected to many endogenous and exogenous damages. All organisms have
developed a complex network of DNA repair mechanisms. A variety of different DNA repair …

Impact of a stress-inducible switch to mutagenic repair of DNA breaks on mutation in Escherichia coli

C Shee, JL Gibson, MC Darrow… - Proceedings of the …, 2011 - National Acad Sciences
Basic ideas about the constancy and randomness of mutagenesis that drives evolution were
challenged by the discovery of mutation pathways activated by stress responses. These …

Topoisomerase III acts at the replication fork to remove precatenanes

CM Lee, G Wang, A Pertsinidis… - Journal of bacteriology, 2019 - Am Soc Microbiol
The role of DNA topoisomerase III (Topo III) in bacterial cells has proven elusive. Whereas
eukaryotic Top IIIα homologs are clearly involved with homologs of the bacterial DNA …

Bacterial topoisomerase I as a target for discovery of antibacterial compounds

YC Tse-Dinh - Nucleic acids research, 2009 - academic.oup.com
Bacterial topoisomerase I is a potential target for discovery of new antibacterial compounds.
Mutant topoisomerases identified by SOS induction screening demonstrated that …

Topoisomerases I and III inhibit R-loop formation to prevent unregulated replication in the chromosomal Ter region of Escherichia coli

J Brochu, É Vlachos-Breton, S Sutherland… - PLoS …, 2018 - journals.plos.org
Type 1A topoisomerases (topos) are the only ubiquitous topos. E. coli has two type 1A topos,
topo I (topA) and topo III (topB). Topo I relaxes negative supercoiling in part to inhibit R-loop …