Am I ready for CRISPR? A user's guide to genetic screens

JG Doench - Nature Reviews Genetics, 2018 - nature.com
Exciting new technologies are often self-limiting in their rollout, as access to state-of-the-art
instrumentation or the need for years of hands-on experience, for better or worse, ensures …

Emerging and evolving concepts in gene essentiality

G Rancati, J Moffat, A Typas, N Pavelka - Nature Reviews Genetics, 2018 - nature.com
Gene essentiality is a founding concept of genetics with important implications in both
fundamental and applied research. Multiple screens have been performed over the years in …

Systematic analysis of complex genetic interactions

E Kuzmin, B VanderSluis, W Wang, G Tan… - Science, 2018 - science.org
INTRODUCTION Genetic interactions occur when mutations in different genes combine to
result in a phenotype that is different from expectation based on those of the individual …

Global genetic networks and the genotype-to-phenotype relationship

M Costanzo, E Kuzmin, J van Leeuwen, B Mair… - Cell, 2019 - cell.com
Genetic interactions identify combinations of genetic variants that impinge on phenotype.
With whole-genome sequence information available for thousands of individuals within a …

A bacterial pan-genome makes gene essentiality strain-dependent and evolvable

F Rosconi, E Rudmann, J Li, D Surujon, J Anthony… - Nature …, 2022 - nature.com
Many bacterial species are represented by a pan-genome, whose genetic repertoire far
outstrips that of any single bacterial genome. Here we investigate how a bacterial pan …

Genetic modifiers and rare Mendelian disease

KMTH Rahit, M Tarailo-Graovac - Genes, 2020 - mdpi.com
Despite advances in high-throughput sequencing that have revolutionized the discovery of
gene defects in rare Mendelian diseases, there are still gaps in translating individual …

The sources of adaptive variation

D Charlesworth, NH Barton… - Proceedings of the …, 2017 - royalsocietypublishing.org
The role of natural selection in the evolution of adaptive phenotypes has undergone
constant probing by evolutionary biologists, employing both theoretical and empirical …

Precision oncology: the road ahead

D Senft, MDM Leiserson, E Ruppin, AR Ze'ev - Trends in molecular …, 2017 - cell.com
Current efforts in precision oncology largely focus on the benefit of genomics-guided
therapy. Yet, advances in sequencing techniques provide an unprecedented view of the …

Global analysis of the yeast knockout phenome

G Turco, C Chang, RY Wang, G Kim, EH Stoops… - Science …, 2023 - science.org
Genome-wide phenotypic screens in the budding yeast Saccharomyces cerevisiae, enabled
by its knockout collection, have produced the largest, richest, and most systematic …

The proteomic landscape of genome-wide genetic perturbations

CB Messner, V Demichev, J Muenzner, SK Aulakh… - Cell, 2023 - cell.com
Functional genomic strategies have become fundamental for annotating gene function and
regulatory networks. Here, we combined functional genomics with proteomics by quantifying …