Copy number variants in schizophrenia: confirmation of five previous findings and new evidence for 3q29 microdeletions and VIPR2 duplications

DF Levinson, J Duan, S Oh, K Wang… - American Journal of …, 2011 - Am Psychiatric Assoc
Objective: To evaluate previously reported associations of copy number variants (CNVs)
with schizophrenia and to identify additional associations, the authors analyzed CNVs in the …

Detecting simultaneous changepoints in multiple sequences

NR Zhang, DO Siegmund, H Ji, JZ Li - Biometrika, 2010 - academic.oup.com
We discuss the detection of local signals that occur at the same location in multiple one-
dimensional noisy sequences, with particular attention to relatively weak signals that may …

Post-selection inference for changepoint detection algorithms with application to copy number variation data

S Hyun, KZ Lin, M G'Sell, RJ Tibshirani - Biometrics, 2021 - academic.oup.com
Changepoint detection methods are used in many areas of science and engineering, for
example, in the analysis of copy number variation data to detect abnormalities in copy …

Parent-specific copy number in paired tumor–normal studies using circular binary segmentation

AB Olshen, H Bengtsson, P Neuvial… - …, 2011 - academic.oup.com
Motivation: High-throughput techniques facilitate the simultaneous measurement of DNA
copy number at hundreds of thousands of sites on a genome. Older techniques allow …

Change-point model on nonhomogeneous Poisson processes with application in copy number profiling by next-generation DNA sequencing

JJ Shen, NR Zhang - 2012 - projecteuclid.org
We propose a flexible change-point model for inhomogeneous Poisson Processes, which
arise naturally from next-generation DNA sequencing, and derive score and generalized …

[HTML][HTML] Multiple change-point detection via a screening and ranking algorithm

N Hao, YS Niu, H Zhang - Statistica Sinica, 2013 - ncbi.nlm.nih.gov
Abstract Let Y 1,…, Y n be a sequence whose underlying mean is a step function with an
unknown number of the steps and unknown change points. The detection of the change …

Genome-wide association study of multiplex schizophrenia pedigrees

DF Levinson, J Shi, K Wang, S Oh… - American Journal of …, 2012 - Am Psychiatric Assoc
Objective The authors used a genome-wide association study (GWAS) of multiply affected
families to investigate the association of schizophrenia to common single-nucleotide …

A fused lasso latent feature model for analyzing multi-sample aCGH data

G Nowak, T Hastie, JR Pollack, R Tibshirani - Biostatistics, 2011 - academic.oup.com
Array-based comparative genomic hybridization (aCGH) enables the measurement of DNA
copy number across thousands of locations in a genome. The main goals of analyzing …

Increased rare duplication burden genomewide in patients with treatment-resistant schizophrenia

AK Martin, B Mowry - Psychological medicine, 2016 - cambridge.org
BackgroundA significant number of patients with schizophrenia fail to respond to
antipsychotic medication. Although several studies have investigated associated patient …

A simple Bayesian approach to multiple change-points

TL Lai, H Xing - Statistica Sinica, 2011 - JSTOR
After a brief review of previous frequentist and Bayesian approaches to multiple change-
points, we describe a Bayesian model for multiple parameter changes in a multiparameter …