The role of DEAD-box ATPases in gene expression and the regulation of RNA–protein condensates

K Weis, M Hondele - Annual review of biochemistry, 2022 - annualreviews.org
DEAD-box ATPases constitute a very large protein family present in all cells, often in great
abundance. From bacteria to humans, they play critical roles in many aspects of RNA …

DEAD-box ATPases as regulators of biomolecular condensates and membrane-less organelles

D Overwijn, M Hondele - Trends in Biochemical Sciences, 2023 - cell.com
RNA-dependent DEAD-box ATPases (DDXs) are emerging as major regulators of RNA-
containing membrane-less organelles (MLOs). On the one hand, oligomerizing DDXs can …

Deciphering how naturally occurring sequence features impact the phase behaviours of disordered prion-like domains

A Bremer, M Farag, WM Borcherds, I Peran… - Nature …, 2022 - nature.com
Prion-like low-complexity domains (PLCDs) have distinctive sequence grammars that
determine their driving forces for phase separation. Here we uncover the physicochemical …

Disease‐linked TDP‐43 hyperphosphorylation suppresses TDP‐43 condensation and aggregation

LA Gruijs da Silva, F Simonetti, S Hutten… - The EMBO …, 2022 - embopress.org
Post‐translational modifications (PTMs) have emerged as key modulators of protein phase
separation and have been linked to protein aggregation in neurodegenerative disorders …

Capillary flow experiments for thermodynamic and kinetic characterization of protein liquid-liquid phase separation

EGP Stender, S Ray, RK Norrild, JA Larsen… - Nature …, 2021 - nature.com
Liquid-liquid phase separation or LLPS of proteins is a field of mounting importance and the
value of quantitative kinetic and thermodynamic characterization of LLPS is increasingly …

Biomolecular condensates: Sequence determinants of phase separation, microstructural organization, enzymatic activity, and material properties

BS Schuster, RM Regy, EM Dolan… - The journal of …, 2021 - ACS Publications
This perspective article highlights recent progress and emerging challenges in
understanding the formation and function of membraneless organelles (MLOs). A long-term …

Intrinsically disordered regions that drive phase separation form a robustly distinct protein class

AI Ibrahim, N Khaodeuanepheng, D Amarasekara… - Biophysical …, 2023 - cell.com
Liquid-liquid phase separation (LLPS) of proteins is thought to be a primary driving force for
the formation of membraneless organelles, which control a wide range of biological …

Structural and functional organization of germ plasm condensates

A Chiappetta, J Liao, S Tian, T Trcek - Biochemical Journal, 2022 - portlandpress.com
Reproductive success of metazoans relies on germ cells. These cells develop early during
embryogenesis, divide and undergo meiosis in the adult to make sperm and oocytes. Unlike …

[PDF][PDF] Disease-linked TDP-43 hyperphosphorylation suppresses TDP-43 condensation and aggregation

LAG Da Silva, F Simonetti, S Hutten… - Embo …, 2022 - openscience.ub.uni-mainz.de
Post-translational modifications (PTMs) have emerged as key modulators of protein phase
separation and have been linked to protein aggregation in neurodegenerative disorders …

Surface tension measurement and calculation of model biomolecular condensates

J Holland, AA Castrejón-Pita, R Tuinier, DGAL Aarts… - Soft Matter, 2023 - pubs.rsc.org
The surface tension of liquid-like protein-rich biomolecular condensates is an emerging
physical principle governing the mesoscopic interior organisation of biological cells. In this …