The role of AI in drug discovery: challenges, opportunities, and strategies

A Blanco-Gonzalez, A Cabezon, A Seco-Gonzalez… - Pharmaceuticals, 2023 - mdpi.com
Artificial intelligence (AI) has the potential to revolutionize the drug discovery process,
offering improved efficiency, accuracy, and speed. However, the successful application of AI …

Machine learning for synergistic network pharmacology: a comprehensive overview

F Noor, M Asif, UA Ashfaq, M Qasim… - Briefings in …, 2023 - academic.oup.com
Network pharmacology is an emerging area of systematic drug research that attempts to
understand drug actions and interactions with multiple targets. Network pharmacology has …

Interpretation of structure–activity relationships in real-world drug design data sets using explainable artificial intelligence

T Harren, H Matter, G Hessler, M Rarey… - Journal of Chemical …, 2022 - ACS Publications
In silico models based on Deep Neural Networks (DNNs) are promising for predicting
activities and properties of new molecules. Unfortunately, their inherent black-box character …

Application of machine learning models for property prediction to targeted protein degraders

G Peteani, MTD Huynh, G Gerebtzoff… - Nature …, 2024 - nature.com
Abstract Machine learning (ML) systems can model quantitative structure-property
relationships (QSPR) using existing experimental data and make property predictions for …

Computer-aided drug design towards new psychotropic and neurological drugs

G Dorahy, JZ Chen, T Balle - Molecules, 2023 - mdpi.com
Central nervous system (CNS) disorders are a therapeutic area in drug discovery where
demand for new treatments greatly exceeds approved treatment options. This is complicated …

Practical guide to SHAP analysis: Explaining supervised machine learning model predictions in drug development

AV Ponce‐Bobadilla, V Schmitt… - Clinical and …, 2024 - Wiley Online Library
Despite increasing interest in using Artificial Intelligence (AI) and Machine Learning (ML)
models for drug development, effectively interpreting their predictions remains a challenge …

Artificial intelligence and machine learning for lead-to-candidate decision-making and beyond

D McNair - Annual review of pharmacology and toxicology, 2023 - annualreviews.org
The use of artificial intelligence (AI) and machine learning (ML) in pharmaceutical research
and development has to date focused on research: target identification; docking-, fragment …

Deep learning approach to the discovery of novel bisbenzazole derivatives for antimicrobial effect

T Barcin, MA Yucel, RH Ersan, MA Alagoz… - Journal of Molecular …, 2024 - Elsevier
Because of the growing bacterial resistance to antibiotics, the discovery of new antibiotics is
critical. The search for new antimicrobial drugs that are effective in treating new and existing …

Vismodegib Identified as a Novel COX-2 Inhibitor via Deep-Learning-Based Drug Repositioning and Molecular Docking Analysis

M Yasir, J Park, ET Han, WS Park, JH Han, YS Kwon… - ACS …, 2023 - ACS Publications
Artificial intelligence algorithms have been increasingly applied in drug development due to
their efficiency and effectiveness. Deep-learning-based drug repurposing can contribute to …

A dpll (t) framework for verifying deep neural networks

H Duong, TV Nguyen, M Dwyer - arXiv preprint arXiv:2307.10266, 2023 - arxiv.org
Deep Neural Networks (DNNs) have emerged as an effective approach to tackling real-
world problems. However, like human-written software, DNNs can have bugs and can be …