Genome-wide selection signatures detection in Shanghai Holstein cattle population identified genes related to adaption, health and reproduction traits
D Liu, Z Chen, W Zhao, L Guo, H Sun, K Zhu, G Liu… - BMC genomics, 2021 - Springer
Background Over several decades, a wide range of natural and artificial selection events in
response to subtropical environments, intensive pasture and intensive feedlot systems have …
response to subtropical environments, intensive pasture and intensive feedlot systems have …
[HTML][HTML] Genome-wide association study on milk production and somatic cell score for Thai dairy cattle using weighted single-step approach with random regression …
S Buaban, K Lengnudum, W Boonkum… - Journal of Dairy …, 2022 - Elsevier
ABSTRACTS Genome-wide association studies are a powerful tool to identify genomic
regions and variants associated with phenotypes. However, only limited mutual confirmation …
regions and variants associated with phenotypes. However, only limited mutual confirmation …
Whole genome sequencing revealed genetic diversity, population structure, and selective signature of Panou Tibetan sheep
H Shi, T Li, M Su, H Wang, Q Li, X Lang, Y Ma - BMC genomics, 2023 - Springer
Background The detection of selective traits in different populations can not only reveal
current mechanisms of artificial selection for breeding, but also provide new insights into …
current mechanisms of artificial selection for breeding, but also provide new insights into …
Characterization of runs of homozygosity, heterozygosity-enriched regions, and population structure in cattle populations selected for different breeding goals
Background A decline in the level of genetic diversity in livestock can result in reduced
response to selection, greater incidence of genetic defects, and inbreeding depression. In …
response to selection, greater incidence of genetic defects, and inbreeding depression. In …
Genetic diversity in the Italian Holstein dairy cattle based on pedigree and SNP data prior and after genomic selection
Genetic diversity has become an urgent matter not only in small local breeds but also in
more specialized ones. While the use of genomic data in livestock breeding programs …
more specialized ones. While the use of genomic data in livestock breeding programs …
Insights into genetic diversity, runs of homozygosity and heterozygosity-rich regions in Maremmana semi-feral cattle using pedigree and genomic data
Simple Summary In this study, we estimated genetic diversity in semi-feral Maremmana
cattle using both pedigree-and genomic-based approaches, and detected regions of …
cattle using both pedigree-and genomic-based approaches, and detected regions of …
Genomic measures of inbreeding coefficients and genome-wide scan for runs of homozygosity islands in Iranian river buffalo, Bubalus bubalis
Background Consecutive homozygous fragments of a genome inherited by offspring from a
common ancestor are known as runs of homozygosity (ROH). ROH can be used to calculate …
common ancestor are known as runs of homozygosity (ROH). ROH can be used to calculate …
Genome-wide SNP analysis reveals the population structure and the conservation status of 23 Italian chicken breeds
Simple Summary To assess the conservation status and the genomic variability of Italian
chicken breeds, we carried out genome-wide analyses using single nucleotide …
chicken breeds, we carried out genome-wide analyses using single nucleotide …
Selection, recombination and population history effects on runs of homozygosity (ROH) in wild red deer (Cervus elaphus)
The distribution of runs of homozygosity (ROH) may be shaped by a number of interacting
processes such as selection, recombination and population history, but little is known about …
processes such as selection, recombination and population history, but little is known about …
Runs of homozygosity provide a genome landscape picture of inbreeding and genetic history of European autochthonous and commercial pig breeds
ROHs are long stretches of DNA homozygous at each polymorphic position. The proportion
of genome covered by ROHs and their length are indicators of the level and origin of …
of genome covered by ROHs and their length are indicators of the level and origin of …