[HTML][HTML] Comparison of genomic prediction accuracy using different models for egg production traits in Taiwan country chicken

TC Tu, CJ Lin, MC Liu, ZT Hsu, CF Chen - Poultry Science, 2024 - Elsevier
In local chickens targeted for niche markets, genotyping costs are relatively high due to the
small population size and diverse breeding goals. The single-step genomic best linear …

[PDF][PDF] Accelerating single-step evaluations through GPU offloading

A Freudenberg, M Schlather… - Interbull …, 2023 - madoc.bib.uni-mannheim.de
Abstract Single Nucleotide Polymorphism (SNP) genotype datasets used in empirical
research are steadily growing in size which has introduced challenges in the calculation of …

Software project'miraculix': Efficient computations with large genomic datasets

M Schlather, A Freudenberg, G Moerkotte… - Interbull …, 2023 - journal.interbull.org
We present mathematical approaches for CPU accelerations to calculate matrix
multiplications between a Single Nucleotide Polymorphism (SNP) matrix and another SNP …

Novel techniques for accelerating statistical operations on compressed genomic data

A Freudenberg - 2023 - madoc.bib.uni-mannheim.de
Over the last decades, the availability of genetic data has exploded and genomic information
is widely used in a variety of fields today. While the cost of genotyping and sequence …