WENDY: Covariance dynamics based gene regulatory network inference

Y Wang, P Zheng, YC Cheng, Z Wang… - Mathematical …, 2024 - Elsevier
Determining gene regulatory network (GRN) structure is a central problem in biology, with a
variety of inference methods available for different types of data. For a widely prevalent and …

WENDY: Gene Regulatory Network Inference with Covariance Dynamics

Y Wang, P Zheng, Y Cheng, Z Wang, A Aravkin - bioRxiv, 2024 - biorxiv.org
Determining the structure of gene regulatory networks (GRNs) is a central problem in
biology, with a variety of inference methods available for different types of data. However, for …

TRENDY: Gene Regulatory Network Inference Enhanced by Transformer

X Tian, Y Patel, Y Wang - bioRxiv, 2024 - biorxiv.org
Gene regulatory networks (GRNs) play a crucial role in the control of cellular functions.
Numerous methods have been developed to infer GRNs from gene expression data …