State grammar and deep pushdown automata for biological sequences of nucleic acids
N Kalra, A Kumar - Current Bioinformatics, 2016 - ingentaconnect.com
In this paper, we represent deoxyribonucleic acid (DNA) and ribonucleic acid (RNA)
biological sequences using state grammar and deep pushdown automata. The major benefit …
biological sequences using state grammar and deep pushdown automata. The major benefit …
Modeling of RNA secondary structures using two-way quantum finite automata
AS Bhatia, A Kumar - Chaos, Solitons & Fractals, 2018 - Elsevier
Quantum finite automata (QFA) play a crucial role in quantum information processing theory.
The representation of ribonucleic acid (RNA) and deoxyribonucleic acid (DNA) structures …
The representation of ribonucleic acid (RNA) and deoxyribonucleic acid (DNA) structures …
Evolutionary analyses of base-pairing interactions in DNA and RNA secondary structures
Pairs of nucleotides within functional nucleic acid secondary structures often display
evidence of coevolution that is consistent with the maintenance of base-pairing. Here, we …
evidence of coevolution that is consistent with the maintenance of base-pairing. Here, we …
Probabilistic models of RNA secondary structure
JWJ Anderson - 2013 - ora.ox.ac.uk
This thesis develops probabilistic models of RNA secondary structure. The first chapter
introduces RNA secondary structure prediction, in particular stochastic context-free …
introduces RNA secondary structure prediction, in particular stochastic context-free …
[PDF][PDF] A Genetic Algorithm for Evolving Stochastic Context-Free Grammars
Ribonucleic acid (RNA) secondary structure prediction is an important problem in molecular
biology; almost as soon as RNA started to be sequenced, methods have been established to …
biology; almost as soon as RNA started to be sequenced, methods have been established to …