[图书][B] Discrete-event modeling and simulation: a practitioner's approach

GA Wainer - 2017 - taylorfrancis.com
Complex artificial dynamic systems require advanced modeling techniques that can
accommodate their asynchronous, concurrent, and highly non-linear nature. Discrete Event …

Physiologically based synthetic models of hepatic disposition

CA Hunt, GEP Ropella, L Yan, DY Hung… - … of pharmacokinetics and …, 2006 - Springer
Current physiologically based pharmacokinetic (PBPK) models are inductive. We present an
additional, different approach that is based on the synthetic rather than the inductive …

Discrete event modelling and simulation in systems biology

R Ewald, C Maus, A Rolfs, A Uhrmacher - Journal of Simulation, 2007 - Taylor & Francis
Abstract With Systems Biology, a promising new application area for modelling and
simulation emerges. Today's biologists are facing huge amounts of data delivered at …

Prediction of in vitro hepatic biliary excretion using stochastic agent-based modeling and fuzzy clustering

S Sheikh-Bahaei, CA Hunt - Proceedings of the 2006 Winter …, 2006 - ieeexplore.ieee.org
We present a method for estimating (predicting) parameter values for an agent-based model
of in silico hepatocytes (ISH). The method enables the ISH to interact with simulated drugs to …

[PDF][PDF] Methodological considerations of heuristic modeling of biological systems

GEP Ropella, CA Hunt, S Sheikh-Bahaei - Proceedings of the 9th world …, 2005 - cahlab.com
We present the basics of a modeling method, FURM (Functional Unit Representation
Method) that attempts to address a fundamental difference in the practice of biological …

[PDF][PDF] Agent-based simulation of in vitro hepatic drug metabolism: in silico hepatic intrinsic clearance

S Sheikh-Bahaei, GEP Ropella… - … (San Diego, CA, Apr 2-8) …, 2005 - researchgate.net
Agent-Based Simulation of In Vitro Hepatic Drug Metabolism: In Silico Hepatic Intrinsic
Clearance Page 1 PREPRINT Paper accepted: 01/07/05 – 1 – 2005 Spring Simulation …

[PDF][PDF] Advanced DEVS models with application to biomedicine

G Wainer, S Jafer, B Al-Aubidy… - Artificial …, 2007 - cell-devs-02.sce.carleton.ca
Simulation is becoming increasingly important in the analysis and design of complex
systems such as those involving biological processes. The complexity of these systems …

[PDF][PDF] In silico hepatocyte: agent-based modeling of the biliary excretion of drugs in vitro

S Sheikh-Bahaei, GEP Ropella, CA Hunt - Simulation Series, 2006 - cahlab.com
We have used a stochastic agent directed, cellular automatabased synthetic method to
instantiate, test, and partially validate simulation models of cultured primary hepatocytes (the …

DEVS modelling and simulation of the cellular metabolism by mitochondria

G Wainer, R Djafarzadeh - Molecular Simulation, 2010 - Taylor & Francis
We present a method for modelling and simulating metabolic pathways in the cells (namely,
the glycolysis and Krebs' cycle), using the discrete event system specification (DEVS) …

[PDF][PDF] PISL: A large-scale in silico experimental framework for agent-directed physiological models

S Park, CA Hunt, GEP Ropella - … '05), The Society for Modeling and …, 2005 - researchgate.net
We present in silico, physiologically-based rat liver models that are designed for large-scale
and high-performance experimentation and analysis. We refer to the framework used as the …