Structure and mechanism of helicases and nucleic acid translocases

MR Singleton, MS Dillingham, DB Wigley - Annu. Rev. Biochem., 2007 - annualreviews.org
Helicases and translocases are a ubiquitous, highly diverse group of proteins that perform
an extraordinary variety of functions in cells. Consequently, this review sets out to define a …

Molecular views of recombination proteins and their control

SC West - Nature reviews Molecular cell biology, 2003 - nature.com
The efficient repair of double-strand breaks in DNA is critical for the maintenance of genome
stability and cell survival. Homologous recombination provides an efficient and faithful …

Mitochondrial DNA replication defects disturb cellular dNTP pools and remodel one-carbon metabolism

J Nikkanen, S Forsström, L Euro, I Paetau, RA Kohnz… - Cell metabolism, 2016 - cell.com
Mitochondrial dysfunction affects cellular energy metabolism, but less is known about the
consequences for cytoplasmic biosynthetic reactions. We report that mtDNA replication …

The AAA ATPase Cdc48/p97 and its partners transport proteins from the ER into the cytosol

Y Ye, HH Meyer, TA Rapoport - Nature, 2001 - nature.com
In eukaryotic cells, incorrectly folded proteins in the endoplasmic reticulum (ER) are
exported into the cytosol and degraded by the proteasome. This pathway is co-opted by …

Phot1 and phot2 mediate blue light regulation of stomatal opening

T Kinoshita, M Doi, N Suetsugu, T Kagawa, M Wada… - Nature, 2001 - nature.com
The stomatal pores of higher plants allow for gaseous exchange into and out of leaves.
Situated in the epidermis, they are surrounded by a pair of guard cells which control their …

Evolutionary relationships and structural mechanisms of AAA+ proteins

JP Erzberger, JM Berger - Annu. Rev. Biophys. Biomol. Struct., 2006 - annualreviews.org
Complex cellular events commonly depend on the activity of molecular “machines” that
efficiently couple enzymatic and regulatory functions within a multiprotein assembly. An …

AAA+ superfamily ATPases: common structure–diverse function

T Ogura, AJ Wilkinson - Genes to Cells, 2001 - Wiley Online Library
The AAA+ superfamily of ATPases, which contain a homologous ATPase module, are found
in all kingdoms of living organisms where they participate in diverse cellular processes …

Human mitochondrial DNA deletions associated with mutations in the gene encoding Twinkle, a phage T7 gene 4-like protein localized in mitochondria

JN Spelbrink, FY Li, V Tiranti, K Nikali, QP Yuan… - Nature …, 2001 - nature.com
The gene products involved in mammalian mitochondrial DNA (mtDNA) maintenance and
organization remain largely unknown. We report here a novel mitochondrial protein …

Docking of the proteasomal ATPases' carboxyl termini in the 20S proteasome's α ring opens the gate for substrate entry

DM Smith, SC Chang, S Park, D Finley, Y Cheng… - Molecular cell, 2007 - cell.com
The 20S proteasome functions in protein degradation in eukaryotes together with the 19S
ATPases or in archaea with the homologous PAN ATPase complex. These ATPases contain …

3D domain swapping: as domains continue to swap

Y Liu, D Eisenberg - Protein science, 2002 - Wiley Online Library
Abstract Three‐dimensional (3D) domain swapping creates a bond between two or more
protein molecules as they exchange their identical domains. Since the term'3D domain …