Updated picture of SARS-CoV-2 variants and mutations

G Lippi, C Mattiuzzi, BM Henry - Diagnosis, 2022 - degruyter.com
The worldwide burden of coronavirus disease 2019 (COVID-19) is still unremittingly
prosecuting, with nearly 300 million infections and over 5.3 million deaths recorded so far …

SARS-CoV-2: an update on the biological interplay with the human host

G Lippi, F Sanchis-Gomar, C Mattiuzzi, BM Henry - COVID, 2023 - mdpi.com
Coronavirus Disease 2019 (COVID-19) is an infectious respiratory illness caused by severe
acute respiratory syndrome coronavirus 2 (SARS-CoV-2). The disease, first identified in the …

Predicting COVID-19 disease severity from SARS-CoV-2 spike protein sequence by mixed effects machine learning

BA Sokhansanj, GL Rosen - Computers in biology and medicine, 2022 - Elsevier
Epidemiological studies show that COVID-19 variants-of-concern, like Delta and Omicron,
pose different risks for severe disease, but they typically lack sequence-level information for …

Interpretable and predictive deep neural network modeling of the SARS-Cov-2 spike protein sequence to predict COVID-19 disease severity

BA Sokhansanj, Z Zhao, GL Rosen - Biology, 2022 - mdpi.com
Simple Summary As COVID-19 shifts from pandemic to endemic, emerging variants may be
more or less virulent. Predicting whether an emerging COVID-19 variant has of high risk of …

Evaluating the transmission feasibility of SARS-CoV-2 Omicron (B. 1.1. 529) variant to 143 mammalian hosts: insights from S protein RBD and host ACE2 interaction …

A Samanta, SSM Alam, S Ali, M Hoque - Functional & Integrative …, 2023 - Springer
In comparison to previously known severe respiratory syndrome coronavirus 2 (SARS-CoV-
2) variants, the newly emerged Omicron (B. 1.1. 529) variant shows higher infectivity in …

Safety and immunogenicity of COVID-19 BBIBP-CorV vaccine in children 3–12 years old

K Greish, A Alawadhi, A Jaradat, A Almarabheh… - Vaccines, 2022 - mdpi.com
Background and Objectives: In the current COVID-19 pandemic, children below the age of
12 could manifest COVID-19 symptoms and serve as a reservoir for the virus in the …

Interpretable and predictive deep modeling of the SARS-CoV-2 spike protein sequence

BA Sokhansanj, Z Zhao, GL Rosen - medRxiv, 2021 - medrxiv.org
As the COVID-19 pandemic continues, the SARS-CoV-2 virus continues to rapidly mutate
and change in ways that impact virulence, transmissibility, and immune evasion. Genome …

Phylogenetic analysis and comparative genomics of SARS-CoV-2 from survivor and non-survivor COVID-19 patients in Cordoba, Argentina

NB Olivero, AS Gonzalez-Reiche, VE Re, GM Castro… - BMC genomics, 2022 - Springer
Abstract Background The SARS-CoV-2 virus is responsible for the COVID-19 pandemic. To
better understand the evolution of SARS-CoV-2 early in the pandemic in the Province of …

Phylogeogenomic analysis of the earliest reported sequences of SARS‐CoV‐2 from 161 countries

R Laskar, M Hoque, S Ali - APMIS, 2025 - Wiley Online Library
The SARS‐CoV‐2 is the causative agent of COVID‐19 whose evolutionary path with
geographical context forms the focus of present study. The first reported sequence from each …

[HTML][HTML] Genetic path of the emergence of SARS-CoV-2

T Nasrin, S Ali - Gene, Cell and Tissue, 2022 - brieflands.com
Context: Severe acute respiratory syndrome corona virus 2 (SARS-CoV-2) is the seventh
coronavirus that has humans as the host. Because of its highly infectious nature, toward the …