RNA adopts 3D structures that confer varied functional roles in human biology and
dysfunction in disease. Approaches to therapeutically target RNA structures with small …

With both catalytic and genetic functions, ribonucleic acid (RNA) is perhaps the most
pluripotent chemical species in molecular biology, and its functions are intimately linked to …

Background Secondary structure forms an important intermediate level of description of
nucleic acids that encapsulates the dominating part of the folding energy, is often well …

Dynamic DNA nanotechnology involves the creation of nanoscale devices made of DNA
whose primary function arises from their ability to undergo controlled motion or …

The abbreviated name,'mfold web server', describes a number of closely related software
applications available on the World Wide Web (WWW) for the prediction of the secondary …

In recent years, DNA has emerged as a fascinating building material to engineer hydrogel
due to its excellent programmability, which has gained considerable attention in biomedical …

This paper presents a new computer method for folding an RNA molecule that finds a
conformation of minimum free energy using published values of stacking and destabilizing …

We report the complete thermodynamic library of all 10 Watson-Crick DNA nearest-neighbor
interactions. We obtained the relevant thermodynamic data from calorimetric studies on 19 …

A novel application of dynamic programming to the folding problem for RNA enables one to
calculate the full equilibrium partition function for secondary structure and the probabilities of …

With a stepwise degradation and terminal labeling procedure the 3′-terminal sequence of
E. coli 16S ribosomal RNA is shown to be Pyd-ACCUCCUU-AOH. It is suggested that this …