Mass spectrometry–based proteomics turns quantitative

SE Ong, M Mann - Nature chemical biology, 2005 - nature.com
The field of proteomics is built on technologies to analyze large numbers of proteins—ideally
the entire proteome—in the same experiment. Mass spectrometry (MS) has been …

Cortactin: cell functions of a multifaceted actin-binding protein

M Schnoor, TE Stradal, K Rottner - Trends in cell biology, 2018 - cell.com
Cortactin fulfills many functions in various cell types. These functions have been considered
to derive from its ability to activate the Actin-related protein 2/3 (Arp2/3) complex, and are …

Immunoaffinity profiling of tyrosine phosphorylation in cancer cells

J Rush, A Moritz, KA Lee, A Guo, VL Goss… - Nature …, 2005 - nature.com
Tyrosine kinases play a prominent role in human cancer, yet the oncogenic signaling
pathways driving cell proliferation and survival have been difficult to identify, in part because …

Oxidative stress-mediated regulation of proteasome complexes

CT Aiken, RM Kaake, X Wang, L Huang - Molecular & Cellular Proteomics, 2011 - ASBMB
Oxidative stress has been implicated in aging and many human diseases, notably
neurodegenerative disorders and various cancers. The reactive oxygen species that are …

Getting connected: analysis and principles of biological networks

X Zhu, M Gerstein, M Snyder - Genes & development, 2007 - genesdev.cshlp.org
The execution of complex biological processes requires the precise interaction and
regulation of thousands of molecules. Systematic approaches to study large numbers of …

Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway* S

A Gruhler, JV Olsen, S Mohammed, P Mortensen… - Molecular & cellular …, 2005 - ASBMB
Cellular processes such as proliferation, differentiation, and adaptation to environmental
changes are regulated by protein phosphorylation. Development of sensitive and …

Sticky signaling—adhesion class G protein–coupled receptors take the stage

T Langenhan, G Aust, J Hamann - Science signaling, 2013 - science.org
Adhesion-type heterotrimeric guanine nucleotide–binding protein (G protein)–coupled
receptors (Adhesion-GPCRs) comprise a class of widely distributed seven-transmembrane …

Analytical strategies for phosphoproteomics

TE Thingholm, ON Jensen, MR Larsen - Proteomics, 2009 - Wiley Online Library
Protein phosphorylation is a key regulator of cellular signaling pathways. It is involved in
most cellular events in which the complex interplay between protein kinases and protein …

Kinomics: methods for deciphering the kinome

SA Johnson, T Hunter - Nature methods, 2005 - nature.com
Phosphorylation by protein kinases is the most widespread and well-studied signaling
mechanism in eukaryotic cells. Phosphorylation can regulate almost every property of a …

Time-resolved Mass Spectrometry of Tyrosine Phosphorylation Sites in the Epidermal Growth Factor Receptor Signaling Network Reveals Dynamic Modules* S

Y Zhang, A Wolf-Yadlin, PL Ross, DJ Pappin… - Molecular & Cellular …, 2005 - ASBMB
Ligand binding to cell surface receptors initiates a cascade of signaling events regulated by
dynamic phosphorylation events on a multitude of pathway proteins. Quantitative features …