Chromatin modifiers and remodellers: regulators of cellular differentiation

T Chen, SYR Dent - Nature Reviews Genetics, 2014 - nature.com
Cellular differentiation is, by definition, epigenetic. Genome-wide profiling of pluripotent cells
and differentiated cells suggests global chromatin remodelling during differentiation, which …

Protein post-translational modifications and regulation of pluripotency in human stem cells

YC Wang, SE Peterson, JF Loring - Cell research, 2014 - nature.com
Post-translational modifications (PTMs) are known to be essential mechanisms used by
eukaryotic cells to diversify their protein functions and dynamically coordinate their signaling …

Class I histone deacetylases are major histone decrotonylases: evidence for critical and broad function of histone crotonylation in transcription

W Wei, X Liu, J Chen, S Gao, L Lu, H Zhang, G Ding… - Cell research, 2017 - nature.com
Recent studies on enzymes and reader proteins for histone crotonylation support a function
of histone crotonylation in transcription. However, the enzyme (s) responsible for histone …

Histone H3 globular domain acetylation identifies a new class of enhancers

MM Pradeepa, GR Grimes, Y Kumar, G Olley… - Nature …, 2016 - nature.com
Histone acetylation is generally associated with active chromatin, but most studies have
focused on the acetylation of histone tails. Various histone H3 and H4 tail acetylations mark …

Epigenetic regulation of pluripotency and differentiation

MJ Boland, KL Nazor, JF Loring - Circulation research, 2014 - Am Heart Assoc
The precise, temporal order of gene expression during development is critical to ensure
proper lineage commitment, cell fate determination, and ultimately, organogenesis …

[HTML][HTML] Control of embryonic stem cell identity by BRD4-dependent transcriptional elongation of super-enhancer-associated pluripotency genes

R Di Micco, B Fontanals-Cirera, V Low, P Ntziachristos… - Cell reports, 2014 - cell.com
Transcription factors and chromatin-remodeling complexes are key determinants of
embryonic stem cell (ESC) identity. Here, we demonstrate that BRD4, a member of the …

Essential role of lncRNA binding for WDR5 maintenance of active chromatin and embryonic stem cell pluripotency

YW Yang, RA Flynn, Y Chen, K Qu, B Wan, KC Wang… - elife, 2014 - elifesciences.org
The WDR5 subunit of the MLL complex enforces active chromatin and can bind RNA; the
relationship between these two activities is unclear. Here we identify a RNA binding pocket …

H4K16 acetylation marks active genes and enhancers of embryonic stem cells, but does not alter chromatin compaction

GCA Taylor, R Eskeland, B Hekimoglu-Balkan… - Genome …, 2013 - genome.cshlp.org
Compared with histone H3, acetylation of H4 tails has not been well studied, especially in
mammalian cells. Yet, H4K16 acetylation is of particular interest because of its ability to …

Embryonic stem cell and induced pluripotent stem cell: an epigenetic perspective

G Liang, Y Zhang - Cell research, 2013 - nature.com
Pluripotent stem cells, like embryonic stem cells (ESCs), have specialized epigenetic
landscapes, which are important for pluripotency maintenance. Transcription factor …

Complex-dependent histone acetyltransferase activity of KAT8 determines its role in transcription and cellular homeostasis

A Radzisheuskaya, PV Shliaha, VV Grinev, D Shlyueva… - Molecular cell, 2021 - cell.com
Acetylation of lysine 16 on histone H4 (H4K16ac) is catalyzed by histone acetyltransferase
KAT8 and can prevent chromatin compaction in vitro. Although extensively studied in …