[HTML][HTML] Classification of Aspergillus, Penicillium, Talaromyces and related genera (Eurotiales): An overview of families, genera, subgenera, sections, series and …

J Houbraken, S Kocsubé, CM Visagie, N Yilmaz… - Studies in mycology, 2020 - Elsevier
The Eurotiales is a relatively large order of Ascomycetes with members frequently having
positive and negative impact on human activities. Species within this order gain attention …

The fungal tree of life: from molecular systematics to genome‐scale phylogenies

JW Spatafora, MC Aime, IV Grigoriev… - The fungal …, 2017 - Wiley Online Library
In 1996 the genome of Saccharomyces cerevisiae was published and marked the beginning
of a new era in fungal biology (1). Since then, rapid advancements in both sequencing …

Large-scale generation and analysis of filamentous fungal DNA barcodes boosts coverage for kingdom fungi and reveals thresholds for fungal species and higher …

D Vu, M Groenewald, M De Vries… - Studies in …, 2019 - ingentaconnect.com
Species identification lies at the heart of biodiversity studies that has in recent years
favoured DNA-based approaches. Microbial Biological Resource Centres are a rich source …

Accurate and complete genomes from metagenomes

LX Chen, K Anantharaman, A Shaiber… - Genome …, 2020 - genome.cshlp.org
Genomes are an integral component of the biological information about an organism; thus,
the more complete the genome, the more informative it is. Historically, bacterial and …

Genome-reconstruction for eukaryotes from complex natural microbial communities

PT West, AJ Probst, IV Grigoriev, BC Thomas… - Genome …, 2018 - genome.cshlp.org
Microbial eukaryotes are integral components of natural microbial communities, and their
inclusion is critical for many ecosystem studies, yet the majority of published metagenome …

The lichen symbiosis re-viewed through the genomes of Cladonia grayi and its algal partner Asterochloris glomerata

D Armaleo, O Müller, F Lutzoni, ÓS Andrésson, G Blanc… - BMC genomics, 2019 - Springer
Abstract Background Lichens, encompassing 20,000 known species, are symbioses
between specialized fungi (mycobionts), mostly ascomycetes, and unicellular green algae or …

Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum

M Peter, A Kohler, RA Ohm, A Kuo, J Krützmann… - Nature …, 2016 - nature.com
The most frequently encountered symbiont on tree roots is the ascomycete Cenococcum
geophilum, the only mycorrhizal species within the largest fungal class Dothideomycetes, a …

The truffle microbiome: species and geography effects on bacteria associated with fruiting bodies of hypogeous Pezizales

GMN Benucci, GM Bonito - Microbial ecology, 2016 - Springer
Fungi that produce their fruiting bodies underground within the soil profile are known
commonly as truffles. Truffle fruiting bodies harbor a diverse but poorly understood microbial …

Phylogenomics of Endogonaceae and evolution of mycorrhizas within Mucoromycota

Y Chang, A Desirò, H Na, L Sandor, A Lipzen… - New …, 2019 - Wiley Online Library
Summary Endogonales (Mucoromycotina), composed of Endogonaceae and
Densosporaceae, is the only known non‐Dikarya order with ectomycorrhizal members. They …

Bacterial communities in boreal forest mushrooms are shaped both by soil parameters and host identity

M Pent, K Põldmaa, M Bahram - Frontiers in microbiology, 2017 - frontiersin.org
Despite recent advances in understanding the microbiome of eukaryotes, little is known
about microbial communities in fungi. Here we investigate the structure of bacterial …