Processing and classification of protein mass spectra

M Hilario, A Kalousis, C Pellegrini… - Mass spectrometry …, 2006 - Wiley Online Library
Among the many applications of mass spectrometry, biomarker pattern discovery from
protein mass spectra has aroused considerable interest in the past few years. While …

[HTML][HTML] Bayesian approach with prior models which enforce sparsity in signal and image processing

A Mohammad-Djafari - EURASIP Journal on Advances in Signal …, 2012 - Springer
In this review article, we propose to use the Bayesian inference approach for inverse
problems in signal and image processing, where we want to infer on sparse signals or …

A MAP-based algorithm for spectroscopic semi-blind deconvolution

H Liu, T Zhang, L Yan, H Fang, Y Chang - Analyst, 2012 - pubs.rsc.org
Spectroscopic data often suffer from common problems of bands overlapping and random
noise. In this paper, we show that the issue of overlapping peaks can be considered as a …

Semi-blind spectral deconvolution with adaptive Tikhonov regularization

L Yan, H Liu, S Zhong, H Fang - Applied spectroscopy, 2012 - journals.sagepub.com
Deconvolution has become one of the most used methods for improving spectral resolution.
Deconvolution is an ill-posed problem, especially when the point spread function (PSF) is …

Reconstructing population exposures to environmental chemicals from biomarkers: challenges and opportunities

PG Georgopoulos, AF Sasso, SS Isukapalli… - Journal of exposure …, 2009 - nature.com
A conceptual/computational framework for exposure reconstruction from biomarker data
combined with auxiliary exposure-related data is presented, evaluated with example …

Positive deconvolution for superimposed extended source and point sources

JF Giovannelli, A Coulais - Astronomy & Astrophysics, 2005 - aanda.org
The paper deals with the construction of images from visibilities acquired using aperture
synthesis instruments: Fourier synthesis, deconvolution, and spectral interpolation …

Maximum entropy deconvolution of infrared spectra: use of a novel entropy expression without sign restriction

VA Lórenz-Fonfría, E Padrós - Applied spectroscopy, 2005 - opg.optica.org
Absorbance and difference infrared spectra are often acquired aiming to characterize
protein structure and structural changes of proteins upon ligand binding, as well as for many …

An unrolled half-quadratic approach for sparse signal recovery in spectroscopy

M Gharbi, E Chouzenoux, JC Pesquet - Signal Processing, 2024 - Elsevier
This paper addresses the problem of sparse signal reconstruction frequently arising in
analytical chemistry. Spectroscopic restoration is an important task that was tackled using …

Image analysis tools and emerging algorithms for expression proteomics

AW Dowsey, JA English, F Lisacek, JS Morris… - …, 2010 - Wiley Online Library
Since their origins in academic endeavours in the 1970s, computational analysis tools have
matured into a number of established commercial packages that underpin research in …

Transformation of time-resolved spectra to lifetime-resolved spectra by maximum entropy inversion of the laplace transform

VA Lórenz-Fonfría, H Kandori - Applied spectroscopy, 2006 - opg.optica.org
We present a method for the analysis of time-resolved spectroscopic data following first-
order kinetics. The time traces at all the available spectroscopic channels (eg, wavelength or …