Evolutionary conservation of long non-coding RNAs; sequence, structure, function

P Johnsson, L Lipovich, D Grandér… - Biochimica et Biophysica …, 2014 - Elsevier
Background Recent advances in genomewide studies have revealed the abundance of long
non-coding RNAs (lncRNAs) in mammalian transcriptomes. The ENCODE Consortium has …

Long noncoding RNAs in cell-fate programming and reprogramming

RA Flynn, HY Chang - Cell stem cell, 2014 - cell.com
In recent years, long noncoding RNAs (lncRNAs) have emerged as an important class of
regulators of gene expression. lncRNAs exhibit several distinctive features that confer …

Genomic maps of long noncoding RNA occupancy reveal principles of RNA-chromatin interactions

C Chu, K Qu, FL Zhong, SE Artandi, HY Chang - Molecular cell, 2011 - cell.com
Long noncoding RNAs (lncRNAs) are key regulators of chromatin state, yet the nature and
sites of RNA-chromatin interaction are mostly unknown. Here we introduce Chromatin …

[HTML][HTML] A model for neural development and treatment of Rett syndrome using human induced pluripotent stem cells

MCN Marchetto, C Carromeu, A Acab, D Yu, GW Yeo… - Cell, 2010 - cell.com
Autism spectrum disorders (ASD) are complex neurodevelopmental diseases in which
different combinations of genetic mutations may contribute to the phenotype. Using Rett …

Polycomb proteins targeted by a short repeat RNA to the mouse X chromosome

J Zhao, BK Sun, JA Erwin, JJ Song, JT Lee - Science, 2008 - science.org
To equalize X-chromosome dosages between the sexes, the female mammal inactivates
one of her two X chromosomes. X-chromosome inactivation (XCI) is initiated by expression …

Child health, developmental plasticity, and epigenetic programming

Z Hochberg, R Feil, M Constancia, M Fraga… - Endocrine …, 2011 - academic.oup.com
Plasticity in developmental programming has evolved in order to provide the best chances of
survival and reproductive success to the organism under changing environments …

HATs and HDACs: from structure, function and regulation to novel strategies for therapy and prevention

XJ Yang, E Seto - Oncogene, 2007 - go.gale.com
Acetylation of the [var epsilon]-amino group of a lysine residue was first discovered with
histones in 1968, but the responsible enzymes, histone acetyltransferases and …

YY1 tethers Xist RNA to the inactive X nucleation center

Y Jeon, JT Lee - Cell, 2011 - cell.com
The long noncoding Xist RNA inactivates one X chromosome in the female mammal.
Current models posit that Xist induces silencing as it spreads along X and recruits Polycomb …

The long noncoding RNA, Jpx, is a molecular switch for X chromosome inactivation

D Tian, S Sun, JT Lee - Cell, 2010 - cell.com
Once protein-coding, the X-inactivation center (Xic) is now dominated by large noncoding
RNAs (ncRNA). X chromosome inactivation (XCI) equalizes gene expression between …

Reversal of histone lysine trimethylation by the JMJD2 family of histone demethylases

JR Whetstine, A Nottke, F Lan, M Huarte, S Smolikov… - Cell, 2006 - cell.com
Histone methylation regulates chromatin structure, transcription, and epigenetic state of the
cell. Histone methylation is dynamically regulated by histone methylases and demethylases …