Spatial biology of cancer evolution

Z Seferbekova, A Lomakin, LR Yates… - Nature Reviews …, 2023 - nature.com
The natural history of cancers can be understood through the lens of evolution given that the
driving forces of cancer development are mutation and selection of fitter clones. Cancer …

Aneuploidy and complex genomic rearrangements in cancer evolution

TM Baker, S Waise, M Tarabichi, P Van Loo - Nature cancer, 2024 - nature.com
Mutational processes that alter large genomic regions occur frequently in developing
tumors. They range from simple copy number gains and losses to the shattering and …

Insights for precision oncology from the integration of genomic and clinical data of 13,880 tumors from the 100,000 Genomes Cancer Programme

A Sosinsky, J Ambrose, W Cross, C Turnbull… - Nature Medicine, 2024 - nature.com
Abstract The Cancer Programme of the 100,000 Genomes Project was an initiative to
provide whole-genome sequencing (WGS) for patients with cancer, evaluating opportunities …

Western diets and chronic diseases

TE Adolph, H Tilg - Nature medicine, 2024 - nature.com
Abstract 'Westernization', which incorporates industrial, cultural and dietary trends, has
paralleled the rise of noncommunicable diseases across the globe. Today, the Western-style …

Translating p53-based therapies for cancer into the clinic

S Peuget, X Zhou, G Selivanova - Nature Reviews Cancer, 2024 - nature.com
Inactivation of the most important tumour suppressor gene TP53 occurs in most, if not all,
human cancers. Loss of functional wild-type p53 is achieved via two main mechanisms …

Five latent factors underlie response to immunotherapy

J Usset, A Rosendahl Huber, MA Andrianova… - Nature Genetics, 2024 - nature.com
Only a subset of patients treated with immune checkpoint inhibitors (CPIs) respond to the
treatment, and distinguishing responders from non-responders is a major challenge. Many …

Mapping extrachromosomal DNA amplifications during cancer progression

H Kim, S Kim, T Wade, E Yeo, A Lipsa… - Nature Genetics, 2024 - nature.com
To understand the role of extrachromosomal DNA (ecDNA) amplifications in cancer
progression, we detected and classified focal amplifications in 8,060 newly diagnosed …

Genetic immune escape landscape in primary and metastatic cancer

F Martínez-Jiménez, P Priestley, C Shale, J Baber… - Nature Genetics, 2023 - nature.com
Studies have characterized the immune escape landscape across primary tumors. However,
whether late-stage metastatic tumors present differences in genetic immune escape (GIE) …

FGFR-targeted therapeutics: Clinical activity, mechanisms of resistance and new directions

M Katoh, Y Loriot, G Brandi, S Tavolari… - Nature Reviews …, 2024 - nature.com
Fibroblast growth factor (FGF) signalling via FGF receptors (FGFR1–4) orchestrates fetal
development and contributes to tissue and whole-body homeostasis, but can also promote …

Whole-genome doubling in tissues and tumors

MA Vittoria, RJ Quinton, NJ Ganem - Trends in Genetics, 2023 - cell.com
The overwhelming majority of proliferating somatic human cells are diploid, and this
genomic state is typically maintained across successive cell divisions. However, failures in …