Mechanistic landscape of membrane-permeabilizing peptides

S Guha, J Ghimire, E Wu, WC Wimley - Chemical reviews, 2019 - ACS Publications
Membrane permeabilizing peptides (MPPs) are as ubiquitous as the lipid bilayer
membranes they act upon. Produced by all forms of life, most membrane permeabilizing …

Membrane active peptides and their biophysical characterization

FG Avci, B Sariyar Akbulut, E Ozkirimli - Biomolecules, 2018 - mdpi.com
In the last 20 years, an increasing number of studies have been reported on membrane
active peptides. These peptides exert their biological activity by interacting with the cell …

Computational 'microscopy'of cellular membranes

HI Ingólfsson, C Arnarez, X Periole… - Journal of cell …, 2016 - journals.biologists.com
Computational 'microscopy'refers to the use of computational resources to simulate the
dynamics of a molecular system. Tuned to cell membranes, this computational …

Biophysical investigations elucidating the mechanisms of action of antimicrobial peptides and their synergism

A Marquette, B Bechinger - Biomolecules, 2018 - mdpi.com
Biophysical and structural investigations are presented with a focus on the membrane lipid
interactions of cationic linear antibiotic peptides such as magainin, PGLa, LL37, and melittin …

The mechanisms of action of cationic antimicrobial peptides refined by novel concepts from biophysical investigations

C Aisenbrey, A Marquette, B Bechinger - Antimicrobial Peptides: Basics …, 2019 - Springer
Even 30 years after the discovery of magainins, biophysical and structural investigations on
how these peptides interact with membranes can still bear surprises and add new …

Molecular mechanism of synergy between the antimicrobial peptides PGLa and magainin 2

J Zerweck, E Strandberg, O Kukharenko, J Reichert… - Scientific reports, 2017 - nature.com
Abstract PGLa and magainin 2 (MAG2) are amphiphilic α-helical membranolytic peptides
from frog skin with known synergistic antimicrobial activity. By systematically mutating …

Spontaneous formation of structurally diverse membrane channel architectures from a single antimicrobial peptide

Y Wang, CH Chen, D Hu, MB Ulmschneider… - Nature …, 2016 - nature.com
Many antimicrobial peptides (AMPs) selectively target and form pores in microbial
membranes. However, the mechanisms of membrane targeting, pore formation and function …

Mechanistic understanding from molecular dynamics in pharmaceutical research 2: lipid membrane in drug design

T Róg, M Girych, A Bunker - Pharmaceuticals, 2021 - mdpi.com
We review the use of molecular dynamics (MD) simulation as a drug design tool in the
context of the role that the lipid membrane can play in drug action, ie, the interaction …

The SMART model: Soft Membranes Adapt and Respond, also Transiently, in the presence of antimicrobial peptides

B Bechinger - Journal of Peptide Science, 2015 - Wiley Online Library
Biophysical and structural studies of peptide–lipid interactions, peptide topology and
dynamics have changed our view on how antimicrobial peptides insert and interact with …

[HTML][HTML] How reliable are molecular dynamics simulations of membrane active antimicrobial peptides?

Y Wang, T Zhao, D Wei, E Strandberg, AS Ulrich… - … et Biophysica Acta (BBA …, 2014 - Elsevier
Membrane-active antimicrobial peptides (AMPs) are challenging to study experimentally, but
relatively easy to investigate using molecular dynamics (MD) computer simulations. For this …