Alternative splicing as a source of phenotypic diversity

CJ Wright, CWJ Smith, CD Jiggins - Nature Reviews Genetics, 2022 - nature.com
A major goal of evolutionary genetics is to understand the genetic processes that give rise to
phenotypic diversity in multicellular organisms. Alternative splicing generates multiple …

[HTML][HTML] Integration strategy of network pharmacology in Traditional Chinese Medicine: a narrative review

WU Jiashuo, F ZHANG, LI Zhuangzhuang… - Journal of Traditional …, 2022 - ncbi.nlm.nih.gov
Abstract Traditional Chinese Medicine (TCM) has been extensively used as a mainstay for
treating various pathologies. Combing the pharmacology and systems biology approaches …

Lower airway dysbiosis affects lung cancer progression

JCJ Tsay, BG Wu, I Sulaiman, K Gershner, R Schluger… - Cancer discovery, 2021 - AACR
In lung cancer, enrichment of the lower airway microbiota with oral commensals commonly
occurs, and ex vivo models support that some of these bacteria can trigger host …

Efficient proximity labeling in living cells and organisms with TurboID

TC Branon, JA Bosch, AD Sanchez, ND Udeshi… - Nature …, 2018 - nature.com
Protein interaction networks and protein compartmentalization underlie all signaling and
regulatory processes in cells. Enzyme-catalyzed proximity labeling (PL) has emerged as a …

Microbial signatures in the lower airways of mechanically ventilated COVID-19 patients associated with poor clinical outcome

I Sulaiman, M Chung, L Angel, JCJ Tsay, BG Wu… - Nature …, 2021 - nature.com
Respiratory failure is associated with increased mortality in COVID-19 patients. There are no
validated lower airway biomarkers to predict clinical outcome. We investigated whether …

Next-generation sequencing in oncology: genetic diagnosis, risk prediction and cancer classification

R Kamps, RD Brandão, BJ van den Bosch… - International journal of …, 2017 - mdpi.com
Next-generation sequencing (NGS) technology has expanded in the last decades with
significant improvements in the reliability, sequencing chemistry, pipeline analyses, data …

An RNA-sequencing transcriptome and splicing database of glia, neurons, and vascular cells of the cerebral cortex

Y Zhang, K Chen, SA Sloan, ML Bennett… - Journal of …, 2014 - Soc Neuroscience
The major cell classes of the brain differ in their developmental processes, metabolism,
signaling, and function. To better understand the functions and interactions of the cell types …

[HTML][HTML] Translating RNA sequencing into clinical diagnostics: opportunities and challenges

SA Byron, KR Van Keuren-Jensen… - Nature Reviews …, 2016 - nature.com
With the emergence of RNA sequencing (RNA-seq) technologies, RNA-based biomolecules
hold expanded promise for their diagnostic, prognostic and therapeutic applicability in …

The role of m6A/m-RNA methylation in stress response regulation

M Engel, C Eggert, PM Kaplick, M Eder, S Röh, L Tietze… - Neuron, 2018 - cell.com
Summary N 6-methyladenosine (m 6 A) and N 6, 2′-O-dimethyladenosine (m 6 Am) are
abundant mRNA modifications that regulate transcript processing and translation. The role …

The role of sex in the genomics of human complex traits

EA Khramtsova, LK Davis, BE Stranger - Nature Reviews Genetics, 2019 - nature.com
Nearly all human complex traits and disease phenotypes exhibit some degree of sex
differences, including differences in prevalence, age of onset, severity or disease …