Genome editing tools in plants

TK Mohanta, T Bashir, A Hashem, EF Abd_Allah… - Genes, 2017 - mdpi.com
Genome editing tools have the potential to change the genomic architecture of a genome at
precise locations, with desired accuracy. These tools have been efficiently used for trait …

Recent advances and current challenges in synthetic biology of the plastid genetic system and metabolism

CR Boehm, R Bock - Plant Physiology, 2019 - academic.oup.com
Building on recombinant DNA technology, leaps in synthesis, assembly, and analysis of
DNA have revolutionized genetics and molecular biology over the past two decades. These …

Disentangling sources of gene tree discordance in phylogenomic data sets: testing ancient hybridizations in Amaranthaceae sl

DF Morales-Briones, G Kadereit, DT Tefarikis… - Systematic …, 2021 - academic.oup.com
Gene tree discordance in large genomic data sets can be caused by evolutionary processes
such as incomplete lineage sorting and hybridization, as well as model violation, and errors …

Plastome phylogeny and early diversification of Brassicaceae

X Guo, J Liu, G Hao, L Zhang, K Mao, X Wang… - BMC genomics, 2017 - Springer
Abstract Background The family Brassicaceae encompasses diverse species, many of which
have high scientific and economic importance. Early diversifications and phylogenetic …

Plastid phylogenomic analyses of Fagales reveal signatures of conflict and ancient chloroplast capture

YY Yang, XJ Qu, R Zhang, GW Stull, TS Yi - Molecular Phylogenetics and …, 2021 - Elsevier
Plastid phylogenomic analyses have shed light on many recalcitrant relationships across the
angiosperm Tree of Life and continue to play an important role in plant phylogenetics …

High‐throughput sequencing of the chloroplast and mitochondrion of Chlamydomonas reinhardtii to generate improved de novo assemblies, analyze expression …

SD Gallaher, ST Fitz‐Gibbon, D Strenkert… - The Plant …, 2018 - Wiley Online Library
Chlamydomonas reinhardtii is a unicellular chlorophyte alga that is widely studied as a
reference organism for understanding photosynthesis, sensory and motile cilia, and for …

The chloroplast genome sequence of bittersweet (Solanum dulcamara): Plastid genome structure evolution in Solanaceae

A Amiryousefi, J Hyvönen, P Poczai - PloS one, 2018 - journals.plos.org
Bittersweet (Solanum dulcamara) is a native Old World member of the nightshade family.
This European diploid species can be found from marshlands to high mountainous regions …

Recombination‐dependent replication and gene conversion homogenize repeat sequences and diversify plastid genome structure

TA Ruhlman, J Zhang, JC Blazier… - American Journal of …, 2017 - Wiley Online Library
PREMISE OF THE STUDY: There is a misinterpretation in the literature regarding the
variable orientation of the small single copy region of plastid genomes (plastomes). The …

Research Progress on endangered plants: a bibliometric analysis

J Xu, P Xiao, TT Li, Z Wang - Biodiversity and Conservation, 2022 - Springer
The rapid extinction of endangered plants (EPs) may lead to the destruction of entire
ecosystems, which will seriously threaten the survival and development of humans …

The Complete Chloroplast Genome of Two Important Annual Clover Species, Trifolium alexandrinum and T. resupinatum: Genome Structure, Comparative Analyses …

Y Xiong, Y Xiong, J He, Q Yu, J Zhao, X Lei, Z Dong… - Plants, 2020 - mdpi.com
Trifolium L., which belongs to the IR lacking clade (IRLC), is one of the largest genera in the
Leguminosae and contains several economically important fodder species. Here, we …