The TYC Dataset for Understanding Instance-Level Semantics and Motions of Cells in Microstructures

C Reich, T Prangemeier… - Proceedings of the IEEE …, 2023 - openaccess.thecvf.com
Segmenting cells and tracking their motion over time is a common task in biomedical
applications. However, predicting accurate instance-wise segmentation and cell motions …

[HTML][HTML] ObiWan-Microbi: OMERO-based integrated workflow for annotating microbes in the cloud

J Seiffarth, T Scherr, B Wollenhaupt, O Neumann… - SoftwareX, 2024 - Elsevier
Automated microscopy techniques combined with high-throughput microfluidic cultivation
systems provide unique insights into living microorganisms, enabling hundreds of …

EAP4EMSIG--Experiment Automation Pipeline for Event-Driven Microscopy to Smart Microfluidic Single-Cells Analysis

N Friederich, AJY Sitcheu, A Nassal, M Pesch… - arXiv preprint arXiv …, 2024 - arxiv.org
Microfluidic Live-Cell Imaging (MLCI) generates high-quality data that allows
biotechnologists to study cellular growth dynamics in detail. However, obtaining these …

2024 World Scientific Publishing Company

TL from Synthetic, A Milias-Argeitis… - Frontiers In Bioimage …, 2024 - books.google.com
In recent years, deep neural networks for cell segmentation have achieved impressive
advances over more traditional computer vision methods. However, generating large …

Transfer Learning from Synthetic Data for Cell Segmentation and Tracking

A Milias-Argeitis, H Kruitbosch - Frontiers in Bioimage Informatics …, 2024 - World Scientific
In recent years, deep neural networks for cell segmentation have achieved impressive
advances over more traditional computer vision methods. However, generating large …

Generative Modelling and Probabilistic Inference of Growth Patterns of Individual Microbes

S Nagarajan - 2022 - diva-portal.org
The fundamental question of how cells maintain their characteristic size remains open. Cell
size measurements made through microscopic time-lapse imaging of microfluidic single cell …

A Modelling Framework for Catalysing Progress in the Rod-Shaped Bacterial Cell Growth Discourse

S Nagarajan, F Lindsten - … on Learning Meaningful Representations of Life - openreview.net
The fundamental question of how cells maintain their characteristic size remains open. Cell
size measurements made through microscopic time-lapse imaging of microfluidic single-cell …