The effects of antibiotics on the microbiome throughout development and alternative approaches for therapeutic modulation

A Langdon, N Crook, G Dantas - Genome medicine, 2016 - Springer
The widespread use of antibiotics in the past 80 years has saved millions of human lives,
facilitated technological progress and killed incalculable numbers of microbes, both …

Engineering bacteria for diagnostic and therapeutic applications

DT Riglar, PA Silver - Nature Reviews Microbiology, 2018 - nature.com
Our ability to generate bacterial strains with unique and increasingly complex functions has
rapidly expanded in recent times. The capacity for DNA synthesis is increasing and costing …

Engineered probiotic Escherichia coli can eliminate and prevent Pseudomonas aeruginosa gut infection in animal models

IY Hwang, E Koh, A Wong, JC March… - Nature …, 2017 - nature.com
Bacteria can be genetically engineered to kill specific pathogens or inhibit their virulence.
We previously developed a synthetic genetic system that allows a laboratory strain of …

A brief history of synthetic biology

DE Cameron, CJ Bashor, JJ Collins - Nature Reviews Microbiology, 2014 - nature.com
The ability to rationally engineer microorganisms has been a long-envisioned goal dating
back more than a half-century. With the genomics revolution and rise of systems biology in …

Principles of genetic circuit design

JAN Brophy, CA Voigt - Nature methods, 2014 - nature.com
Cells navigate environments, communicate and build complex patterns by initiating gene
expression in response to specific signals. Engineers seek to harness this capability to …

Bacterial antagonism in host-associated microbial communities

L García-Bayona, LE Comstock - Science, 2018 - science.org
BACKGROUND Microbial communities are ubiquitous on Earth. The microbiota of different
habitats are diverse and have distinct functional traits, but there are common ecological …

Quorum sensing for population-level control of bacteria and potential therapeutic applications

S Wu, J Liu, C Liu, A Yang, J Qiao - Cellular and Molecular Life Sciences, 2020 - Springer
Quorum sensing (QS), a microbial cell-to-cell communication process, dynamically regulates
a variety of metabolism and physiological activities. In this review, we provide an update on …

Programmable bacteria detect and record an environmental signal in the mammalian gut

JW Kotula, SJ Kerns, LA Shaket… - Proceedings of the …, 2014 - National Acad Sciences
The mammalian gut is a dynamic community of symbiotic microbes that interact with the host
to impact health, disease, and metabolism. We constructed engineered bacteria that survive …

Better together: engineering and application of microbial symbioses

SG Hays, WG Patrick, M Ziesack, N Oxman… - Current opinion in …, 2015 - Elsevier
Highlights•Microbial communities are naturally abundant.•Natural symbioses exhibit
increased robustness and metabolic capabilities.•Technological advances in environmental …

Engineered live bacteria suppress Pseudomonas aeruginosa infection in mouse lung and dissolve endotracheal-tube biofilms

R Mazzolini, I Rodríguez-Arce, L Fernández-Barat… - Nature …, 2023 - nature.com
Engineered live bacteria could provide a new modality for treating lung infections, a major
cause of mortality worldwide. In the present study, we engineered a genome-reduced …