microRNA strand selection: Unwinding the rules

JC Medley, G Panzade… - Wiley Interdisciplinary …, 2021 - Wiley Online Library
Abstract microRNAs (miRNAs) play a central role in the regulation of gene expression by
targeting specific mRNAs for degradation or translational repression. Each miRNA is post …

Molecular mechanisms of RNA interference

RC Wilson, JA Doudna - Annual review of biophysics, 2013 - annualreviews.org
Small RNA molecules regulate eukaryotic gene expression during development and in
response to stresses including viral infection. Specialized ribonucleases and RNA-binding …

Dicer-TRBP complex formation ensures accurate mammalian microRNA biogenesis

RC Wilson, A Tambe, MA Kidwell, CL Noland… - Molecular cell, 2015 - cell.com
RNA-mediated gene silencing in human cells requires the accurate generation of∼ 22 nt
microRNAs (miRNAs) from double-stranded RNA substrates by the endonuclease Dicer …

Mosquito innate immunity

A Kumar, P Srivastava, P Sirisena, SK Dubey, R Kumar… - Insects, 2018 - mdpi.com
Mosquitoes live under the endless threat of infections from different kinds of pathogens such
as bacteria, parasites, and viruses. The mosquito defends itself by employing both physical …

Structural foundations of RNA silencing by Argonaute

J Sheu-Gruttadauria, IJ MacRae - Journal of molecular biology, 2017 - Elsevier
Nearly every cell in the human body contains a set of programmable gene-silencing proteins
named Argonaute. Argonaute proteins mediate gene regulation by small RNAs and thereby …

Homeostatic control of Argonaute stability by microRNA availability

P Smibert, JS Yang, G Azzam, JL Liu… - Nature structural & …, 2013 - nature.com
Homeostatic mechanisms regulate the abundance of several components in small-RNA
pathways. We used Drosophila and mammalian systems to demonstrate a conserved …

Genome-wide analysis of plant nat-siRNAs reveals insights into their distribution, biogenesis and function

X Zhang, J Xia, YE Lii, BE Barrera-Figueroa, X Zhou… - Genome biology, 2012 - Springer
Background Many eukaryotic genomes encode cis-natural antisense transcripts (cis-NATs).
Sense and antisense transcripts may form double-stranded RNAs that are processed by the …

Derivation and characterization of Dicer-and microRNA-deficient human cells

HP Bogerd, AW Whisnant, EM Kennedy, O Flores… - Rna, 2014 - rnajournal.cshlp.org
We have used genome editing to generate inactivating deletion mutations in all three copies
of the dicer (hdcr) gene present in the human cell line 293T. As previously shown in murine …

Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community

S Saha, PS Hosmani, K Villalobos-Ayala, S Miller… - Database, 2017 - academic.oup.com
Abstract The Asian citrus psyllid (Diaphorina citri Kuwayama) is the insect vector of the
bacterium Candidatus Liberibacter asiaticus (CLas), the pathogen associated with citrus …

Genome streamlining in a minute herbivore that manipulates its host plant

R Greenhalgh, W Dermauw, JJ Glas, S Rombauts… - Elife, 2020 - elifesciences.org
The tomato russet mite, Aculops lycopersici, is among the smallest animals on earth. It is a
worldwide pest on tomato and can potently suppress the host's natural resistance. We …