Mechanism of action of ribosomally synthesized and post-translationally modified peptides

C Ongpipattanakul, EK Desormeaux… - Chemical …, 2022 - ACS Publications
Ribosomally synthesized and post-translationally modified peptides (RiPPs) are a natural
product class that has undergone significant expansion due to the rapid growth in genome …

[HTML][HTML] Mitochondrial sirtuins, metabolism, and aging

Z Ji, GH Liu, J Qu - Journal of Genetics and Genomics, 2022 - Elsevier
Maintaining metabolic homeostasis is essential for cellular and organismal health
throughout life. Multiple signaling pathways that regulate metabolism also play critical roles …

Biomarker development in the precision medicine era: lung cancer as a case study

AJ Vargas, CC Harris - Nature reviews cancer, 2016 - nature.com
Precision medicine relies on validated biomarkers with which to better classify patients by
their probable disease risk, prognosis and/or response to treatment. Although …

Supervised, unsupervised, and semi-supervised feature selection: a review on gene selection

JC Ang, A Mirzal, H Haron… - IEEE/ACM transactions …, 2015 - ieeexplore.ieee.org
Recently, feature selection and dimensionality reduction have become fundamental tools for
many data mining tasks, especially for processing high-dimensional data such as gene …

HMGA2 as a critical regulator in cancer development

B Mansoori, A Mohammadi, HJ Ditzel, PHG Duijf… - Genes, 2021 - mdpi.com
The high mobility group protein 2 (HMGA2) regulates gene expression by binding to AT-rich
regions of DNA. Akin to other DNA architectural proteins, HMGA2 is highly expressed in …

The multifaceted functions of sirtuins in cancer

A Chalkiadaki, L Guarente - Nature Reviews Cancer, 2015 - nature.com
The sirtuins (SIRTs; of which there are seven in mammals) are NAD+-dependent enzymes
that regulate a large number of cellular pathways and forestall the progression of ageing …

A review of microarray datasets and applied feature selection methods

V Bolón-Canedo, N Sánchez-Marono… - Information …, 2014 - Elsevier
Microarray data classification is a difficult challenge for machine learning researchers due to
its high number of features and the small sample sizes. Feature selection has been soon …

ConsensusClusterPlus: a class discovery tool with confidence assessments and item tracking

MD Wilkerson, DN Hayes - Bioinformatics, 2010 - academic.oup.com
Unsupervised class discovery is a highly useful technique in cancer research, where
intrinsic groups sharing biological characteristics may exist but are unknown. The …

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

A Subramanian, P Tamayo… - Proceedings of the …, 2005 - National Acad Sciences
Although genomewide RNA expression analysis has become a routine tool in biomedical
research, extracting biological insight from such information remains a major challenge …

Repeated observation of breast tumor subtypes in independent gene expression data sets

T Sørlie, R Tibshirani, J Parker… - Proceedings of the …, 2003 - National Acad Sciences
Characteristic patterns of gene expression measured by DNA microarrays have been used
to classify tumors into clinically relevant subgroups. In this study, we have refined the …