The evolution of spliceosomal introns: patterns, puzzles and progress
S William Roy, W Gilbert - Nature Reviews Genetics, 2006 - nature.com
The origins and importance of spliceosomal introns comprise one of the longest-abiding
mysteries of molecular evolution. Considerable debate remains over several aspects of the …
mysteries of molecular evolution. Considerable debate remains over several aspects of the …
Processed pseudogenes: characteristics and evolution.
EF Vanin - Annual review of genetics, 1985 - europepmc.org
The processed pseudogenes reported to date fall into three categories: those that are a
complete copy of the mRNA transcribed from the functional gene, those that are only a …
complete copy of the mRNA transcribed from the functional gene, those that are only a …
Evaluation of two main RNA-seq approaches for gene quantification in clinical RNA sequencing: polyA+ selection versus rRNA depletion
To allow efficient transcript/gene detection, highly abundant ribosomal RNAs (rRNA) are
generally removed from total RNA either by positive polyA+ selection or by rRNA depletion …
generally removed from total RNA either by positive polyA+ selection or by rRNA depletion …
Influence of RNA extraction methods and library selection schemes on RNA-seq data
M Sultan, V Amstislavskiy, T Risch, M Schuette… - BMC genomics, 2014 - Springer
Background Gene expression analysis by RNA sequencing is now widely used in a number
of applications surveying the whole transcriptomes of cells and tissues. The recent …
of applications surveying the whole transcriptomes of cells and tissues. The recent …
Origin of the human L1 elements: proposed progenitor genes deduced from a consensus DNA sequence
AF Scott, BJ Schmeckpeper, M Abdelrazik, CT Comey… - Genomics, 1987 - Elsevier
A consensus sequence for the human long interspersed repeated DNA element, L1H8
(LINE or KpnI sequence), is presented. The sequence contains two open reading frames …
(LINE or KpnI sequence), is presented. The sequence contains two open reading frames …
Reverse gyrase—a topoisomerase which introduces positive superhelical turns into DNA
A Kikuchi, K Asai - Nature, 1984 - nature.com
An enzymatic activity which converts closed circular DNA into a positively supercoiled form
is present in cellular extracts of Sulfolobus, an acidothermophilic archaebacterium. This …
is present in cellular extracts of Sulfolobus, an acidothermophilic archaebacterium. This …
Mechanisms of nonhomologous recombination in mammalian cells
The primary mechanism of nonhomologous recombination in transfected DNA involves
breakage followed by end joining. To probe the joining step in more detail, linear simian …
breakage followed by end joining. To probe the joining step in more detail, linear simian …
Small nuclear RNAs: RNA sequences, structure, and modifications
R Reddy, H Busch - Structure and function of major and minor small …, 1988 - Springer
All eukaryotic cells contain multiple small nuclear RNAs, designated U-sn At present ten U-
snRNAs have been identified; they account for about 1% total mammalian cellular RNA. Of …
snRNAs have been identified; they account for about 1% total mammalian cellular RNA. Of …
Comparison of three actin-coding sequences in the mouse; evolutionary relationships between the actin genes of warm-blooded vertebrates
S Alonso, A Minty, Y Bourlet, M Buckingham - Journal of Molecular …, 1986 - Springer
We have determined the sequences of three recombinant cDNAs complementary to different
mouse actin mRNAs that contain more than 90% of the coding sequences and complete or …
mouse actin mRNAs that contain more than 90% of the coding sequences and complete or …
The origin and evolution of retroposons
JH Rogers - International review of cytology, 1985 - Elsevier
Publisher Summary This chapter describes the origin and evolution of retroposons. It deals
with two of them which operate on very different timescales:(1) RNA splicing (particularly …
with two of them which operate on very different timescales:(1) RNA splicing (particularly …