On the origin of degeneracy in the genetic code

DL Gonzalez, S Giannerini, R Rosa - Interface Focus, 2019 - royalsocietypublishing.org
The degeneracy of amino acid coding is one of the most crucial and enigmatic aspects of the
genetic code. Different theories about the origin of the genetic code have been developed …

Complete quantum information in the DNA genetic code

M Planat, R Aschheim, MM Amaral, F Fang, K Irwin - Symmetry, 2020 - mdpi.com
We find that the degeneracies and many peculiarities of the DNA genetic code may be
described thanks to two closely related (fivefold symmetric) finite groups. The first group has …

DNA as information

PR Wills - … Transactions of the Royal Society A …, 2016 - royalsocietypublishing.org
This article reviews contributions to this theme issue covering the topic 'DNA as
information'in relation to the structure of DNA, the measure of its information content, the role …

A novel DNA sequence similarity calculation based on simplified pulse-coupled neural network and Huffman coding

X Jin, R Nie, D Zhou, S Yao, Y Chen, J Yu… - Physica A: Statistical …, 2016 - Elsevier
A novel method for the calculation of DNA sequence similarity is proposed based on
simplified pulse-coupled neural network (S-PCNN) and Huffman coding. In this study, we …

Pentamers with non-redundant frames: bias for natural circular code codons

J Demongeot, H Seligmann - Journal of Molecular Evolution, 2020 - Springer
The natural circular code consists of 20 codons (X0) overrepresented in the coding frame of
protein-coding genes as compared to remaining noncoding frames, and X1 and X2 …

Yury Borisovich Rumer and his 'biological papers' on the genetic code

E Fimmel, L Strüngmann - Philosophical Transactions of …, 2016 - royalsocietypublishing.org
Yury Borisovich Rumer was one of the most important theoretical physicists of the former
Soviet Union in the early 1930s. However, he also wrote a few 'biological papers' on the …

DNA as information: at the crossroads between biology, mathematics, physics and chemistry

JHE Cartwright, S Giannerini… - … Transactions of the …, 2016 - royalsocietypublishing.org
On the one hand, biology, chemistry and also physics tell us how the process of translating
the genetic information into life could possibly work, but we are still very far from a complete …

Bijective codon transformations show genetic code symmetries centered on cytosine's coding properties

H Seligmann - Theory in Biosciences, 2018 - Springer
Homology of some RNAs with template DNA requires systematic exchanges between
nucleotides. Such exchanges produce 'swinger'RNA along 23 bijective transformations …

Rumer's transformation: A symmetry puzzle standing for half a century

DL Gonzalez, S Giannerini, R Rosa - Biosystems, 2020 - Elsevier
In 1966, only a few months after the complete elucidation of the standard nuclear genetic
code (Kay, 2000), the Russian theoretical physicist Yury Borisovich Rumer uncovered the …

[图书][B] Ontological Information: Information in the Physical World

R Krzanowski - 2022 - World Scientific
The primary aim of this study is to establish a minimal set of properties for ontological
information in the light of the current research. It assumes that ontological information does …