The concept and examples of type-III photosensitizers for cancer photodynamic therapy

Q Yao, J Fan, S Long, X Zhao, H Li, J Du, K Shao… - Chem, 2022 - cell.com
In conventional photodynamic therapy (PDT), reactive oxygen species are produced to kill
cancer cells based on type-I and type-II mechanisms, and the sensitization of …

Epitranscriptomics: RNA modifications in bacteria and archaea

K Höfer, A Jäschke - Regulating with RNA in Bacteria and …, 2018 - Wiley Online Library
Today, RNA is no longer seen as a mere intermediary, transferring information from genes to
proteins. It has become more and more obvious that RNA plays additional biological roles in …

DpCoA tagSeq: barcoding dpCoA-Capped RNA for direct nanopore sequencing via maleimide-thiol reaction

X Shao, H Zhang, Z Zhu, F Ji, Z He, Z Yang… - Analytical …, 2023 - ACS Publications
Recent discoveries of noncanonical RNA caps, such as nicotinamide adenine dinucleotide
(NAD+) and 3′-dephospho-coenzyme A (dpCoA), have expanded our knowledge of RNA …

CapZyme-seq comprehensively defines promoter-sequence determinants for RNA 5′ capping with NAD+

IO Vvedenskaya, JG Bird, Y Zhang, Y Zhang, X Jiao… - Molecular Cell, 2018 - cell.com
Nucleoside-containing metabolites such as NAD+ can be incorporated as 5′ caps on RNA
by serving as non-canonical initiating nucleotides (NCINs) for transcription initiation by RNA …

Capture and sequencing of NAD-capped RNA sequences with NAD captureSeq

ML Winz, H Cahová, G Nübel, J Frindert, K Höfer… - Nature protocols, 2017 - nature.com
Here we describe a protocol for NAD captureSeq that allows for the identification of
nicotinamide-adenine dinucleotide (NAD)-capped RNA sequences in total RNA samples …

Differentiating RNA from DNA by a molecular fluorescent probe based on the “door-bolt” mechanism biomaterials

Q Yao, H Li, L Xian, F Xu, J Xia, J Fan, J Du, J Wang… - Biomaterials, 2018 - Elsevier
Although excellent florescent probes have been developed for DNA, good probes for RNA
remain lacking. The shortage of reported and commercial RNA probes is attributable to their …

Boronate affinity electrophoresis for the purification and analysis of cofactor-modified RNAs

G Nübel, FA Sorgenfrei, A Jäschke - Methods, 2017 - Elsevier
RNA modifications are widely distributed in Nature, and their thorough analysis helps
answering fundamental biological questions. Nowadays, mass spectrometry or deep …