HLA variation and disease

CA Dendrou, J Petersen, J Rossjohn… - Nature Reviews …, 2018 - nature.com
Fifty years since the first description of an association between HLA and human disease,
HLA molecules have proven to be central to physiology, protective immunity and …

Neoantigen-targeted TCR-engineered T cell immunotherapy: current advances and challenges

Z Pang, M Lu, Y Zhang, Y Gao, J Bai, J Gu, L Xie… - Biomarker …, 2023 - Springer
Adoptive cell therapy using T cell receptor-engineered T cells (TCR-T) is a promising
approach for cancer therapy with an expectation of no significant side effects. In the human …

Integrating T cell receptor sequences and transcriptional profiles by clonotype neighbor graph analysis (CoNGA)

SA Schattgen, K Guion, JC Crawford, A Souquette… - Nature …, 2022 - nature.com
Links between T cell clonotypes, as defined by T cell receptor (TCR) sequences, and
phenotype, as reflected in gene expression (GEX) profiles, surface protein expression and …

Differential IL-2 expression defines developmental fates of follicular versus nonfollicular helper T cells

D DiToro, CJ Winstead, D Pham, S Witte… - Science, 2018 - science.org
INTRODUCTION The adaptive immune system has evolved to mount different types of
responses that are matched to the type of invading pathogen. For CD4+ T cells, this is …

High-throughput discovery of MHC class I-and II-restricted T cell epitopes using synthetic cellular circuits

AC Kohlgruber, MH Dezfulian, BM Sie, CI Wang… - Nature …, 2024 - nature.com
Antigen discovery technologies have largely focused on major histocompatibility complex
(MHC) class I-restricted human T cell receptors (TCRs), leaving methods for MHC class II …

Repertoire analyses reveal T cell antigen receptor sequence features that influence T cell fate

KA Lagattuta, JB Kang, A Nathan, KE Pauken… - Nature …, 2022 - nature.com
T cells acquire a regulatory phenotype when their T cell antigen receptors (TCRs)
experience an intermediate-to high-affinity interaction with a self-peptide presented via the …

The interplay between CD27dull and CD27bright B cells ensures the flexibility, stability, and resilience of human B cell memory

O Grimsholm, EP Mortari, AN Davydov, M Shugay… - Cell reports, 2020 - cell.com
Memory B cells (MBCs) epitomize the adaptation of the immune system to the environment.
We identify two MBC subsets in peripheral blood, CD27 dull and CD27 bright MBCs, whose …

Analysis of gene expression and TCR/B cell receptor profiling of immune cells in primary Sjögren's syndrome by single-cell sequencing

X Hou, X Hong, M Ou, S Meng, T Wang… - The Journal of …, 2022 - journals.aai.org
Primary Sjögren's syndrome (pSS) is a chronic autoimmune disease that is estimated to
affect 35 million people worldwide and is characterized by lymphocytic infiltration, elevated …

HLA autoimmune risk alleles restrict the hypervariable region of T cell receptors

K Ishigaki, KA Lagattuta, Y Luo, EA James… - Nature …, 2022 - nature.com
Polymorphisms in the human leukocyte antigen (HLA) genes strongly influence autoimmune
disease risk. HLA risk alleles may influence thymic selection to increase the frequency of T …

[HTML][HTML] Antigen-specific regulatory T-cell responses to intestinal microbiota

EV Russler-Germain, S Rengarajan, CS Hsieh - Mucosal immunology, 2017 - Elsevier
The mammalian gastrointestinal tract can harbor both beneficial commensal bacteria
important for host health, but also pathogenic bacteria capable of intestinal damage. It is …