Whole slide images are 2d point clouds: Context-aware survival prediction using patch-based graph convolutional networks

RJ Chen, MY Lu, M Shaban, C Chen, TY Chen… - … Image Computing and …, 2021 - Springer
Cancer prognostication is a challenging task in computational pathology that requires
context-aware representations of histology features to adequately infer patient survival …

Deep learning supported discovery of biomarkers for clinical prognosis of liver cancer

J Liang, W Zhang, J Yang, M Wu, Q Dai, H Yin… - Nature Machine …, 2023 - nature.com
Tissue biomarkers are crucial for cancer diagnosis, prognosis assessment and treatment
planning. However, there are few known biomarkers that are robust enough to show true …

Graph moving object segmentation

JH Giraldo, S Javed… - IEEE Transactions on …, 2020 - ieeexplore.ieee.org
Moving Object Segmentation (MOS) is a fundamental task in computer vision. Due to
undesirable variations in the background scene, MOS becomes very challenging for static …

ConSlide: Asynchronous Hierarchical Interaction Transformer with Breakup-Reorganize Rehearsal for Continual Whole Slide Image Analysis

Y Huang, W Zhao, S Wang, Y Fu… - Proceedings of the …, 2023 - openaccess.thecvf.com
Whole slide image (WSI) analysis has become increasingly important in the medical
imaging community, enabling automated and objective diagnosis, prognosis, and …

Two ensemble-CNN approaches for colorectal cancer tissue type classification

E Paladini, E Vantaggiato, F Bougourzi, C Distante… - Journal of …, 2021 - mdpi.com
In recent years, automatic tissue phenotyping has attracted increasing interest in the Digital
Pathology (DP) field. For Colorectal Cancer (CRC), tissue phenotyping can diagnose the …

Nucleus classification in histology images using message passing network

T Hassan, S Javed, A Mahmood, T Qaiser… - Medical Image …, 2022 - Elsevier
Identification of nuclear components in the histology landscape is an important step towards
developing computational pathology tools for the profiling of tumor micro-environment. Most …

Fhist: A benchmark for few-shot classification of histological images

F Shakeri, M Boudiaf, S Mohammadi, I Sheth… - arXiv preprint arXiv …, 2022 - arxiv.org
Few-shot learning has recently attracted wide interest in image classification, but almost all
the current public benchmarks are focused on natural images. The few-shot paradigm is …

Knowledge distillation in histology landscape by multi-layer features supervision

S Javed, A Mahmood, T Qaiser… - IEEE Journal of …, 2023 - ieeexplore.ieee.org
Automatic tissue classification is a fundamental task in computational pathology for profiling
tumor micro-environments. Deep learning has advanced tissue classification performance at …

A graph neural network framework for mapping histological topology in oral mucosal tissue

A Nair, H Arvidsson, JE Gatica V, N Tudzarovski… - BMC …, 2022 - Springer
Background Histological feature representation is advantageous for computer aided
diagnosis (CAD) and disease classification when using predictive techniques based on …

Spatially constrained context-aware hierarchical deep correlation filters for nucleus detection in histology images

S Javed, A Mahmood, J Dias, N Werghi… - Medical Image Analysis, 2021 - Elsevier
Nucleus detection in histology images is a fundamental step for cellular-level analysis in
computational pathology. In clinical practice, quantitative nuclear morphology can be used …