SSR locator: tool for simple sequence repeat discovery integrated with primer design and PCR simulation

LC Maia, DA Palmieri, VQ Souza… - … journal of plant …, 2008 - Wiley Online Library
Microsatellites or SSRs (simple sequence repeats) are ubiquitous short tandem duplications
occurring in eukaryotic organisms. These sequences are among the best marker …

Revisiting an important component of plant genomes: microsatellites

C Gao, X Ren, AS Mason, J Li, W Wang… - Functional Plant …, 2013 - CSIRO Publishing
Microsatellites are some of the most highly variable repetitive DNA tracts in genomes. Few
studies focus on whether the characteristic instability of microsatellites is linked to …

Identification, characterization and utilization of unigene derived microsatellite markers in tea (Camellia sinensis L.)

RK Sharma, P Bhardwaj, R Negi, T Mohapatra… - BMC Plant …, 2009 - Springer
Background Despite great advances in genomic technology observed in several crop
species, the availability of molecular tools such as microsatellite markers has been limited in …

Exploitation of SSR, SRAP and CAPS-SNP markers for genetic diversity of Citrus germplasm collection

MH Amar, MK Biswas, Z Zhang, WW Guo - Scientia Horticulturae, 2011 - Elsevier
The present study was to assess informativeness and efficiency of three different molecular
markers for genetic diversity among 24 Citrus and its relative species. Sixty one SSR, 33 …

Development and characterization of genomic and expressed SSRs in citrus by genome-wide analysis

SR Liu, WY Li, D Long, CG Hu, JZ Zhang - PloS one, 2013 - journals.plos.org
Microsatellites or simple sequence repeats (SSRs) are one of the most popular sources of
genetic markers and play a significant role in plant genetics and breeding. In this study, we …

Identification and characterization of gene-based SSR markers in date palm (Phoenix dactylifera L.)

Y Zhao, R Williams, CS Prakash, G He - BMC plant biology, 2012 - Springer
Abstract Background Date palm (Phoenix dactylifera L.) is an important tree in the Middle
East and North Africa due to the nutritional value of its fruit. Molecular Breeding would …

Breeding, genetic and genomic of citrus for disease resistance

MA Machado, M Cristofani-Yaly… - Revista Brasileira de …, 2011 - SciELO Brasil
Although the citriculture is one of the most important economic activities in Brazil, it is based
on a small number of varieties. This fact has contributed for the vulnerability of the culture …

Genetic variability in Rubus ellipticus collections assessed by morphological traits and EST-SSR markers

S Sharma, R Kaur, K Kumar, D Kumar… - Journal of Plant …, 2021 - Springer
Rubus ellipticus Smith. commonly known as 'Yellow Himalayan raspberry'is an important
member of Rosaceae family with high medicinal importance having antioxidant and …

Identification, validation and cross-species transferability of novel Lavandula EST-SSRs

AM Adal, ZA Demissie, SS Mahmoud - Planta, 2015 - Springer
Main conclusion We identified and characterized EST-SSRs with strong discrimination
power against Lavandula angustifolia and Lavandula x intermedia. The markers also …

[HTML][HTML] Patterns of genetic structure and evidence of Egyptian citrus rootstock based on informative SSR, LTR-IRAP and LTR-REMAP molecular markers

AH Hassan, E Nishawy, M Ali, MH Amar - Journal of Genetic Engineering …, 2021 - Elsevier
Background Releasing the draft genome of sweet orange provides useful information on
genetic structure and molecular marker association with heritable breeding traits in citrus …