Artificial intelligence-driven biomedical genomics

K Guo, M Wu, Z Soo, Y Yang, Y Zhang, Q Zhang… - Knowledge-Based …, 2023 - Elsevier
As genomic research becomes more complex and data-rich, artificial intelligence (AI) has
emerged as a crucial tool for processing and analyzing high-dimensional genomic data …

[HTML][HTML] Applying Natural Language Processing to Textual Data From Clinical Data Warehouses: Systematic Review

A Bazoge, E Morin, B Daille… - JMIR Medical …, 2023 - medinform.jmir.org
Background In recent years, health data collected during the clinical care process have
been often repurposed for secondary use through clinical data warehouses (CDWs), which …

Development of an electronic health record registry to facilitate collection of commission on cancer metrics for patients undergoing surgery for breast cancer

HG Lyu, O Kantor, AD Laws, J McDonald… - JCO Clinical Cancer …, 2022 - ascopubs.org
PURPOSE Accurate and efficient data collection is a challenge for quality improvement
initiatives and clinical research. We describe the development of a custom electronic health …

Natural Language Processing for Analyzing Electronic Health Records and Clinical Notes in Cancer Research: A Review

M Bilal, A Hamza, N Malik - arXiv preprint arXiv:2410.22180, 2024 - arxiv.org
Objective: This review aims to analyze the application of natural language processing (NLP)
techniques in cancer research using electronic health records (EHRs) and clinical notes …

[HTML][HTML] Automating access to real-world evidence

MP Gauthier, JH Law, LW Le, JJN Li, S Zahir… - JTO Clinical and …, 2022 - Elsevier
Introduction Real-world evidence is important in regulatory and funding decisions. Manual
data extraction from electronic health records (EHRs) is time-consuming and challenging to …

Leveraging a pharmacogenomics knowledgebase to formulate a drug response phenotype terminology for genomic medicine

Y Zhao, M Brush, C Wang, AH Wagner, H Liu… - …, 2022 - academic.oup.com
Motivation Despite the increasing evidence of utility of genomic medicine in clinical practice,
systematically integrating genomic medicine information and knowledge into clinical …

Natural language processing–finding the missing link for oncologic data, 2022

A Krauze, K Camphausen - International Journal of …, 2022 - researchlakejournals.com
Oncology like most medical specialties, is undergoing a data revolution at the center of
which lie vast and growing amounts of clinical data in unstructured, semi-structured and …

Expansion of clinical genetic testing since the completion of the human genome project

L Bastarache, RJ Tinker, B Schuler, L Richter… - medRxiv, 2024 - medrxiv.org
The sequencing of the first human genome led to expectations of the widespread use of
genetics in medicine. However, assessing the true impact of genetic testing on clinical …