Comprehensive review of models and methods for inferences in bio-chemical reaction networks
The key processes in biological and chemical systems are described by networks of
chemical reactions. From molecular biology to biotechnology applications, computational …
chemical reactions. From molecular biology to biotechnology applications, computational …
Robust and efficient parameter estimation in dynamic models of biological systems
Background Dynamic modelling provides a systematic framework to understand function in
biological systems. Parameter estimation in nonlinear dynamic models remains a very …
biological systems. Parameter estimation in nonlinear dynamic models remains a very …
Differential equations in data analysis
I Dattner - Wiley Interdisciplinary Reviews: Computational …, 2021 - Wiley Online Library
Differential equations have proven to be a powerful mathematical tool in science and
engineering, leading to better understanding, prediction, and control of dynamic processes …
engineering, leading to better understanding, prediction, and control of dynamic processes …
Parameter synthesis by parallel coloured CTL model checking
We propose a new distributed-memory parallel algorithm for parameter synthesis from CTL
hypotheses. The algorithm colours the state space transitions by different parameterisations …
hypotheses. The algorithm colours the state space transitions by different parameterisations …
On extreme concentrations in chemical reaction networks with incomplete measurements
R Blanquero, E Carrizosa, O Chis… - Industrial & …, 2016 - ACS Publications
A fundamental problem in the analysis of chemical reactions networks consists of identifying
concentration values along time or in steady state which are coherent with the experimental …
concentration values along time or in steady state which are coherent with the experimental …
Determining robust reaction kinetics from limited data
G Ozbuyukkaya, RS Parker, G Veser - AIChE Journal, 2022 - Wiley Online Library
Accurate chemical kinetics are essential for reactor design and operation. However, despite
recent advances in “big data” approaches, availability of kinetic data is often limited in …
recent advances in “big data” approaches, availability of kinetic data is often limited in …
Model checking approach to the analysis of biological systems
Formal verification techniques together with other computer science formal methods have
been recently tailored for applications to biological and biomedical systems. In contrast to …
been recently tailored for applications to biological and biomedical systems. In contrast to …
Model analysis and parameter estimation in biochemical reaction networks
A Gábor - 2017 - digital.csic.es
Kinetic models are central in systems biology to describe and analyse metabolic, generic
and signalling networks. Kinetic models provide a way to summarize and precisely formulate …
and signalling networks. Kinetic models provide a way to summarize and precisely formulate …
[PDF][PDF] Model analysis and parameter estimation in biochemical reaction networks= Biokémiai reakcióhálózatok analízise és paramétereinek becslése
A Gábor - 2017 - real-phd.mtak.hu
Kinetic models are central in systems biology to describe and analyse metabolic, generic
and signalling networks. Kinetic models provide a way to summarize and precisely formulate …
and signalling networks. Kinetic models provide a way to summarize and precisely formulate …
On Extreme Concentrations in Chemical Reaction Networks with Incomplete Measurements
R Blanquero Bravo, EJ Carrizosa Priego… - … Research, 55 (44) …, 2016 - idus.us.es
A fundamental problem in the analysis of chemical reactions networks consists of identifying
concentration values along time or in steady state which are coherent with the experimental …
concentration values along time or in steady state which are coherent with the experimental …