Deciphering bacterial mechanisms of root colonization

HE Knights, B Jorrin, TL Haskett… - Environmental …, 2021 - Wiley Online Library
Bacterial colonization of the rhizosphere is critical for the establishment of plant–bacteria
interactions that represent a key determinant of plant health and productivity. Plants …

Microfluidics as an emerging platform for exploring soil environmental processes: a critical review

X Zhu, K Wang, H Yan, C Liu, X Zhu… - … Science & Technology, 2022 - ACS Publications
Investigating environmental processes, especially those occurring in soils, calls for
innovative and multidisciplinary technologies that can provide insights at the microscale …

State-of-the-art review on the application of microfluidics in biogeotechnology

Y Xiao, B Cao, J Shi, H Wu, X He, C Zhao, J Chu… - Transportation …, 2023 - Elsevier
As a popular research direction in the interdisciplinary fields of bioengineering and
geotechnical engineering, biogeotechnology shows the potential advantages in …

Micro on a macroscale: relating microbial-scale soil processes to global ecosystem function

DN Smercina, VL Bailey… - FEMS Microbiology …, 2021 - academic.oup.com
Soil microorganisms play a key role in driving major biogeochemical cycles and in global
responses to climate change. However, understanding and predicting the behavior and …

Microfluidics at the interface of bacteria and fresh produce

M Ranjbaran, MS Verma - Trends in Food Science & Technology, 2022 - Elsevier
Background: Understanding interactions between bacteria and fresh produce is of practical
importance in the prevention and mitigation of foodborne and plant diseases. Microfluidic …

Plant–Microbe Interactions: From Genes to Ecosystems Using Populus as a Model System

MA Cregger, DL Carper, S Christel… - Phytobiomes …, 2021 - Am Phytopath Society
Plant–microbe symbioses span a continuum from pathogenic to mutualistic, with functional
consequences for both organisms in the symbiosis. In order to increase sustainable food …

Plant–environment microscopy tracks interactions of Bacillus subtilis with plant roots across the entire rhizosphere

Y Liu, D Patko, I Engelhardt… - Proceedings of the …, 2021 - National Acad Sciences
Our understanding of plant–microbe interactions in soil is limited by the difficulty of
observing processes at the microscopic scale throughout plants' large volume of influence …

Hotspots of root-exuded amino acids are created within a rhizosphere-on-a-chip

J Aufrecht, M Khalid, CL Walton, K Tate, JF Cahill… - Lab on a Chip, 2022 - pubs.rsc.org
The rhizosphere is a challenging ecosystem to study from a systems biology perspective
due to its diverse chemical, physical, and biological characteristics. In the past decade …

Pore-scale hydrodynamics influence the spatial evolution of bacterial biofilms in a microfluidic porous network

JA Aufrecht, JD Fowlkes, AN Bible, J Morrell-Falvey… - PloS one, 2019 - journals.plos.org
Bacteria occupy heterogeneous environments, attaching and growing within pores in
materials, living hosts, and matrices like soil. Systems that permit high-resolution …

Emerging sensing, imaging, and computational technologies to scale nano-to macroscale rhizosphere dynamics–Review and research perspectives

AH Ahkami, O Qafoku, T Roose, Q Mou, Y Lu… - Soil Biology and …, 2023 - Elsevier
The soil region influenced by plant roots, ie, the rhizosphere, is one of the most complex
biological habitats on Earth and significantly impacts global carbon flow and transformation …