The IUBMB enzyme classification system, available at the IUBMB ExplorEnz website, uses a
four‐component number (the EC number) that identifies an enzyme in terms of reaction …

Biomass can be classified broadly as all the matter on the earth's surface of recent biological
origin. 1 Biomass includes plant materials such as trees, grasses, agricultural crops, algal …

We present a whole-cell fully dynamical kinetic model (WCM) of JCVI-syn3A, a minimal cell
with a reduced genome of 493 genes that has retained few regulatory proteins or small …

Abstract eQuilibrator (equilibrator. weizmann. ac. il) is a database of biochemical equilibrium
constants and Gibbs free energies, originally designed as a web-based interface. While the …

Contrary to the textbook portrayal of glycolysis as a single pathway conserved across all
domains of life, not all sugar-consuming organisms use the canonical Embden–Meyerhoff …

The laws of thermodynamics constrain the action of biochemical systems. However,
thermodynamic data on biochemical compounds can be difficult to find and is cumbersome …

Koopman operators are infinite‐dimensional operators that globally linearize nonlinear
dynamical systems, making their spectral information valuable for understanding dynamics …

Turnover numbers, also known as k cat values, are fundamental properties of enzymes.
However, k cat data are scarce and measured in vitro, thus may not faithfully represent the in …

In metabolism research, thermodynamics is usually used to determine the directionality of a
reaction or the feasibility of a pathway. However, the relationship between thermodynamic …

Glucose oxidase (GOX) from Aspergillus niger is a well-characterised glycoprotein
consisting of two identical 80-kDa subunits with two FAD co-enzymes bound. Both the DNA …