Harnessing the power of RADseq for ecological and evolutionary genomics
High-throughput techniques based on restriction site-associated DNA sequencing (RADseq)
are enabling the low-cost discovery and genotyping of thousands of genetic markers for any …
are enabling the low-cost discovery and genotyping of thousands of genetic markers for any …
Genotyping-by-sequencing (GBS), an ultimate marker-assisted selection (MAS) tool to accelerate plant breeding
J He, X Zhao, A Laroche, ZX Lu, HK Liu… - Frontiers in plant …, 2014 - frontiersin.org
Marker-assisted selection (MAS) refers to the use of molecular markers to assist phenotypic
selections in crop improvement. Several types of molecular markers, such as single …
selections in crop improvement. Several types of molecular markers, such as single …
Stacks: an analysis tool set for population genomics
Massively parallel short‐read sequencing technologies, coupled with powerful software
platforms, are enabling investigators to analyse tens of thousands of genetic markers. This …
platforms, are enabling investigators to analyse tens of thousands of genetic markers. This …
Genome sequence of the cultivated cotton Gossypium arboreum
The complex allotetraploid nature of the cotton genome (AADD; 2 n= 52) makes genetic,
genomic and functional analyses extremely challenging. Here we sequenced and …
genomic and functional analyses extremely challenging. Here we sequenced and …
Development of high-density genetic maps for barley and wheat using a novel two-enzyme genotyping-by-sequencing approach
Advancements in next-generation sequencing technology have enabled whole genome re-
sequencing in many species providing unprecedented discovery and characterization of …
sequencing in many species providing unprecedented discovery and characterization of …
Genome-wide genetic marker discovery and genotyping using next-generation sequencing
The advent of next-generation sequencing (NGS) has revolutionized genomic and
transcriptomic approaches to biology. These new sequencing tools are also valuable for the …
transcriptomic approaches to biology. These new sequencing tools are also valuable for the …
The genome of the pear (Pyrus bretschneideri Rehd.)
J Wu, Z Wang, Z Shi, S Zhang, R Ming, S Zhu… - Genome …, 2013 - genome.cshlp.org
The draft genome of the pear (Pyrus bretschneideri) using a combination of BAC-by-BAC
and next-generation sequencing is reported. A 512.0-Mb sequence corresponding to 97.1 …
and next-generation sequencing is reported. A 512.0-Mb sequence corresponding to 97.1 …
Switchgrass genomic diversity, ploidy, and evolution: novel insights from a network-based SNP discovery protocol
Switchgrass (Panicum virgatum L.) is a perennial grass that has been designated as an
herbaceous model biofuel crop for the United States of America. To facilitate accelerated …
herbaceous model biofuel crop for the United States of America. To facilitate accelerated …
Genotyping‐by‐sequencing approaches to characterize crop genomes: choosing the right tool for the right application
In the last decade, the revolution in sequencing technologies has deeply impacted crop
genotyping practice. New methods allowing rapid, high‐throughput genotyping of entire …
genotyping practice. New methods allowing rapid, high‐throughput genotyping of entire …
[HTML][HTML] High-throughput SNP genotyping to accelerate crop improvement
MJ Thomson - Plant Breeding and Biotechnology, 2014 - plantbreedbio.org
Recent advances in next-generation sequencing (NGS) and single nucleotide
polymorphism (SNP) genotyping promise to greatly accelerate crop improvement if properly …
polymorphism (SNP) genotyping promise to greatly accelerate crop improvement if properly …