V Raghavan, L Kraft, F Mesny… - Briefings in …, 2022 - academic.oup.com
A transcriptome constructed from short-read RNA sequencing (RNA-seq) is an easily attainable proxy catalog of protein-coding genes when genome assembly is unnecessary …
RNA-seq is currently considered the most powerful, robust and adaptable technique for measuring gene expression and transcription activation at genome-wide level. As the …
K Xu, Y Yang, GH Feng, BF Sun, JQ Chen, YF Li… - Cell research, 2017 - nature.com
METTL3 catalyzes the formation of N 6-methyl-adenosine (m 6 A) which has important roles in regulating various biological processes. However, the in vivo function of Mettl3 remains …
C Evans, J Hardin, DM Stoebel - Briefings in bioinformatics, 2018 - academic.oup.com
RNA-Seq is a widely used method for studying the behavior of genes under different biological conditions. An essential step in an RNA-Seq study is normalization, in which raw …
BW Hounkpe, F Chenou, F de Lima… - Nucleic acids …, 2021 - academic.oup.com
Housekeeping (HK) genes are constitutively expressed genes that are required for the maintenance of basic cellular functions. Despite their importance in the calibration of gene …
Successful treatment of cancer depends on early diagnosis and effective monitoring of patients' response to therapy. Traditional tools based on tumor biopsies lack the sensitivity …
Y Zhao, L Wong, WWB Goh - Scientific reports, 2020 - nature.com
Quantile normalization is an important normalization technique commonly used in high- dimensional data analysis. However, it is susceptible to class-effect proportion effects (the …
Background RNA sequencing technologies have allowed researchers to gain a better understanding of how the transcriptome affects disease. However, sequencing technologies …
D Swift, K Cresswell, R Johnson… - Wiley …, 2023 - Wiley Online Library
The recent development of cost‐effective high‐throughput DNA sequencing technologies has tremendously increased microbiome research. However, it has been well documented …