Toward a common coordinate framework for the human body

JE Rood, T Stuart, S Ghazanfar, T Biancalani, E Fisher… - Cell, 2019 - cell.com
Understanding the genetic and molecular drivers of phenotypic heterogeneity across
individuals is central to biology. As new technologies enable fine-grained and spatially …

Pulmonary hypertension in association with lung disease: quantitative CT and artificial intelligence to the rescue? State-of-the-art review

K Dwivedi, M Sharkey, R Condliffe, JM Uthoff, S Alabed… - Diagnostics, 2021 - mdpi.com
Accurate phenotyping of patients with pulmonary hypertension (PH) is an integral part of
informing disease classification, treatment, and prognosis. The impact of lung disease on PH …

Pulmonary emphysema subtypes defined by unsupervised machine learning on CT scans

ED Angelini, J Yang, PP Balte, EA Hoffman… - Thorax, 2023 - thorax.bmj.com
Background Treatment and preventative advances for chronic obstructive pulmonary
disease (COPD) have been slow due, in part, to limited subphenotypes. We tested if …

Chronic obstructive pulmonary disease: thoracic CT texture analysis and machine learning to predict pulmonary ventilation

A Westcott, DPI Capaldi, DG McCormack, AD Ward… - Radiology, 2019 - pubs.rsna.org
Background Fixed airflow limitation and ventilation heterogeneity are common in chronic
obstructive pulmonary disease (COPD). Conventional noncontrast CT provides airway and …

Deep CNN for COPD identification by Multi-View snapshot integration of 3D airway tree and lung field

Y Wu, R Du, J Feng, S Qi, H Pang, S Xia… - … Signal Processing and …, 2023 - Elsevier
Background Chronic obstructive pulmonary disease (COPD) is a complex and irreversible
respiratory disease with potential morphological abnormalities of the airway and lung fields …

Collaborative cohort of cohorts for COVID-19 research (C4R) study: study design

EC Oelsner, A Krishnaswamy, PP Balte… - American journal of …, 2022 - academic.oup.com
Abstract The Collaborative Cohort of Cohorts for COVID-19 Research (C4R) is a national
prospective study of adults comprising 14 established US prospective cohort studies …

Latent traits of lung tissue patterns in former smokers derived by dual channel deep learning in computed tomography images

F Li, J Choi, C Zou, JD Newell Jr, AP Comellas… - Scientific reports, 2021 - nature.com
Chronic obstructive pulmonary disease (COPD) is a heterogeneous disease and the
traditional variables extracted from computed tomography (CT) images may not be sufficient …

Classification and quantification of emphysema using a multi-scale residual network

L Peng, L Lin, H Hu, H Li, Q Chen… - IEEE journal of …, 2019 - ieeexplore.ieee.org
Automated tissue classification is an essential step for quantitative analysis and treatment of
emphysema. Although many studies have been conducted in this area, there still remain two …

Novel subtypes of pulmonary emphysema based on spatially-informed lung texture learning: the multi-ethnic study of Atherosclerosis (MESA) COPD study

J Yang, ED Angelini, PP Balte… - IEEE transactions on …, 2021 - ieeexplore.ieee.org
Pulmonary emphysema overlaps considerably with chronic obstructive pulmonary disease
(COPD), and is traditionally subcategorized into three subtypes previously identified on …

Subject2Vec: generative-discriminative approach from a set of image patches to a vector

S Singla, M Gong, S Ravanbakhsh, F Sciurba… - … Image Computing and …, 2018 - Springer
We propose an attention-based method that aggregates local image features to a subject-
level representation for predicting disease severity. In contrast to classical deep learning that …