Machine learning-guided protein engineering

P Kouba, P Kohout, F Haddadi, A Bushuiev… - ACS …, 2023 - ACS Publications
Recent progress in engineering highly promising biocatalysts has increasingly involved
machine learning methods. These methods leverage existing experimental and simulation …

Terpenes and terpenoids in plants: Interactions with environment and insects

DAT Boncan, SSK Tsang, C Li, IHT Lee… - International Journal of …, 2020 - mdpi.com
The interactions of plants with environment and insects are bi-directional and dynamic.
Consequently, a myriad of mechanisms has evolved to engage organisms in different types …

Biochemistry of terpenes and recent advances in plant protection

V Ninkuu, L Zhang, J Yan, Z Fu, T Yang… - International Journal of …, 2021 - mdpi.com
Biodiversity is adversely affected by the growing levels of synthetic chemicals released into
the environment due to agricultural activities. This has been the driving force for embracing …

Telomere-to-telomere gapless chromosomes of banana using nanopore sequencing

C Belser, FC Baurens, B Noel, G Martin… - Communications …, 2021 - nature.com
Long-read technologies hold the promise to obtain more complete genome assemblies and
to make them easier. Coupled with long-range technologies, they can reveal the architecture …

Insights into angiosperm evolution, floral development and chemical biosynthesis from the Aristolochia fimbriata genome

L Qin, Y Hu, J Wang, X Wang, R Zhao, H Shan, K Li… - Nature Plants, 2021 - nature.com
Aristolochia, a genus in the magnoliid order Piperales, has been famous for centuries for its
highly specialized flowers and wide medicinal applications. Here, we present a new, high …

Chromosome-scale assembly of the Dendrobium chrysotoxum genome enhances the understanding of orchid evolution

Y Zhang, GQ Zhang, D Zhang, XD Liu… - Horticulture …, 2021 - academic.oup.com
As one of the largest families of angiosperms, the Orchidaceae family is diverse.
Dendrobium represents the second largest genus of the Orchidaceae. However, an …

Biosynthesis of monoterpenoid and sesquiterpenoid as natural flavors and fragrances

H Jiang, X Wang - Biotechnology Advances, 2023 - Elsevier
Terpenoids are a large class of plant-derived compounds, that constitute the main
components of essential oils and are widely used as natural flavors and fragrances. The …

Genome-Wide Identification and Expression Profile of TPS Gene Family in Dendrobium officinale and the Role of DoTPS10 in Linalool Biosynthesis

Z Yu, C Zhao, G Zhang, JA Teixeira da Silva… - International journal of …, 2020 - mdpi.com
Terpene synthase (TPS) is a critical enzyme responsible for the biosynthesis of terpenes,
which possess diverse roles in plant growth and development. Although many terpenes …

A chromosome-scale genome assembly of Artemisia argyi reveals unbiased subgenome evolution and key contributions of gene duplication to volatile terpenoid …

H Chen, M Guo, S Dong, X Wu, G Zhang, L He… - Plant …, 2023 - cell.com
Artemisia argyi Lévl. et Vant., a perennial Artemisia herb with an intense fragrance, is widely
used in traditional medicine in China and many other Asian countries. Here, we present a …

[HTML][HTML] Transcriptome and metabolome profiling unveil the accumulation of flavonoids in Dendrobium officinale

Y Yuan, J Zuo, H Zhang, M Zu, M Yu, S Liu - Genomics, 2022 - Elsevier
Dendrobium officinale is a Chinese herbal medicine with a long history of use in China.
Flavonoids are known to be an important secondary metabolite in Dendrobium officinale, but …