Correlation and association analyses in microbiome study integrating multiomics in health and disease
Y Xia - Progress in molecular biology and translational …, 2020 - Elsevier
Correlation and association analyses are one of the most widely used statistical methods in
research fields, including microbiome and integrative multiomics studies. Correlation and …
research fields, including microbiome and integrative multiomics studies. Correlation and …
Marine microbial community dynamics and their ecological interpretation
Recent advances in studying the dynamics of marine microbial communities have shown
that the composition of these communities follows predictable patterns and involves complex …
that the composition of these communities follows predictable patterns and involves complex …
Distinct patterns and processes of abundant and rare eukaryotic plankton communities following a reservoir cyanobacterial bloom
Plankton communities normally consist of few abundant and many rare species, yet little is
known about the ecological role of rare planktonic eukaryotes. Here we used a 18S …
known about the ecological role of rare planktonic eukaryotes. Here we used a 18S …
Geographic patterns of co-occurrence network topological features for soil microbiota at continental scale in eastern China
Soil microbiota play a critical role in soil biogeochemical processes and have a profound
effect on soil functions. Recent studies have revealed microbial co-occurrence patterns in …
effect on soil functions. Recent studies have revealed microbial co-occurrence patterns in …
[HTML][HTML] Sparse and compositionally robust inference of microbial ecological networks
16S ribosomal RNA (rRNA) gene and other environmental sequencing techniques provide
snapshots of microbial communities, revealing phylogeny and the abundances of microbial …
snapshots of microbial communities, revealing phylogeny and the abundances of microbial …
Wheat rhizosphere harbors a less complex and more stable microbial co-occurrence pattern than bulk soil
The rhizosphere harbors complex microbial communities, whose dynamic associations are
considered critical for plant growth and health but remain poorly understood. We constructed …
considered critical for plant growth and health but remain poorly understood. We constructed …
Life in the “plastisphere”: microbial communities on plastic marine debris
ER Zettler, TJ Mincer… - Environmental science & …, 2013 - ACS Publications
Plastics are the most abundant form of marine debris, with global production rising and
documented impacts in some marine environments, but the influence of plastic on open …
documented impacts in some marine environments, but the influence of plastic on open …
Microbial interactions: from networks to models
Metagenomics and 16S pyrosequencing have enabled the study of ecosystem structure and
dynamics to great depth and accuracy. Co-occurrence and correlation patterns found in …
dynamics to great depth and accuracy. Co-occurrence and correlation patterns found in …
Accelerated microbial reductive dechlorination of 2, 4, 6-trichlorophenol by weak electrical stimulation
Microbial reductive dechlorination of chlorinated aromatics frequently suffers from the long
dechlorination period and the generation of toxic metabolites. Biocathode …
dechlorination period and the generation of toxic metabolites. Biocathode …
Using network analysis to explore co-occurrence patterns in soil microbial communities
Exploring large environmental datasets generated by high-throughput DNA sequencing
technologies requires new analytical approaches to move beyond the basic inventory …
technologies requires new analytical approaches to move beyond the basic inventory …