Extracting abundance information from DNA‐based data

M Luo, Y Ji, D Warton, DW Yu - Molecular Ecology Resources, 2023 - Wiley Online Library
The accurate extraction of species‐abundance information from DNA‐based data
(metabarcoding, metagenomics) could contribute usefully to diet analysis and food‐web …

Oceans of plenty? Challenges, advancements, and future directions for the provision of evidence-based fisheries management advice

DR Goethel, KL Omori, AE Punt, PD Lynch… - Reviews in Fish Biology …, 2023 - Springer
Marine population modeling, which underpins the scientific advice to support fisheries
interventions, is an active research field with recent advancements to address modern …

Toward quantitative metabarcoding

AO Shelton, ZJ Gold, AJ Jensen, ED′ Agnese… - Ecology, 2023 - Wiley Online Library
Amplicon‐sequence data from environmental DNA (eDNA) and microbiome studies provide
important information for ecology, conservation, management, and health. At present …

Toward a national eDNA strategy for the United States

RP Kelly, DM Lodge, KN Lee, S Theroux… - Environmental …, 2024 - Wiley Online Library
Environmental DNA (eDNA) data make it possible to measure and monitor biodiversity at
unprecedented resolution and scale. As use‐cases multiply and scientific consensus grows …

Detecting and analysing intraspecific genetic variation with eDNA: From population genetics to species abundance

KJ Andres, DM Lodge, SA Sethi, J Andrés - Molecular Ecology, 2023 - Wiley Online Library
Advancements in environmental DNA (eDNA) approaches have allowed for rapid and
efficient species detections in diverse environments. Although most eDNA research is …

Signal and noise in metabarcoding data

Z Gold, AO Shelton, HR Casendino, J Duprey… - Plos one, 2023 - journals.plos.org
Metabarcoding is a powerful molecular tool for simultaneously surveying hundreds to
thousands of species from a single sample, underpinning microbiome and environmental …

[HTML][HTML] A comparison of seasonal composition and structure of fish community between environmental DNA technology and gillnetting in the Pearl River Estuary …

Z Li, P Jiang, L Wang, L Liu, M Li, K Zou - Ecological Indicators, 2023 - Elsevier
Non-destructive and cost-effective fish diversity monitoring approaches are needed for the
management and protection of estuarine ecosystems. Environmental DNA (eDNA) …

Environmental DNA complements scientific trawling in surveys of marine fish biodiversity

P Veron, R Rozanski, V Marques, S Joost… - ICES Journal of …, 2023 - academic.oup.com
Environmental DNA (eDNA) metabarcoding is a method to detect taxa from environmental
samples. It is increasingly used for marine biodiversity surveys. As it only requires water …

Environmental DNA analysis for macro-organisms: species distribution and more

T Minamoto - DNA Research, 2022 - academic.oup.com
In an era of severe biodiversity loss, biological monitoring is becoming increasingly
essential. The analysis of environmental DNA (eDNA) has emerged as a new approach that …

Distinct latitudinal community patterns of Arctic marine vertebrates along the East Greenlandic coast detected by environmental DNA

MR Jensen, S Høgslund, SW Knudsen… - Diversity and …, 2023 - Wiley Online Library
Aim Greenland is one of the places on Earth where the effects of climate change are most
evident. The retreat of sea ice has made East Greenland more accessible for longer periods …