Sleep deprivation and the epigenome

ME Gaine, S Chatterjee, T Abel - Frontiers in neural circuits, 2018 - frontiersin.org
Sleep deprivation disrupts the lives of millions of people every day and has a profound
impact on the molecular biology of the brain. These effects begin as changes within a …

[HTML][HTML] Caudovirales bacteriophages are associated with improved executive function and memory in flies, mice, and humans

J Mayneris-Perxachs, A Castells-Nobau… - Cell Host & Microbe, 2022 - cell.com
Growing evidence implicates the gut microbiome in cognition. Viruses, the most abundant
life entities on the planet, are a commonly overlooked component of the gut virome …

Acetyl-CoA synthetase regulates histone acetylation and hippocampal memory

P Mews, G Donahue, AM Drake, V Luczak, T Abel… - Nature, 2017 - nature.com
Metabolic production of acetyl coenzyme A (acetyl-CoA) is linked to histone acetylation and
gene regulation, but the precise mechanisms of this process are largely unknown. Here we …

MicroRNAs and synaptic plasticity: from their molecular roles to response to therapy

AH Mohammadi, S Seyedmoalemi, M Moghanlou… - Molecular …, 2022 - Springer
Synaptic plasticity is the ability of synapses to weaken or strengthen over time, in response
to changes in the activity of the neurons. It is orchestrated by a variety of genes, proteins …

Variation among intact tissue samples reveals the core transcriptional features of human CNS cell classes

KW Kelley, H Nakao-Inoue, AV Molofsky… - Nature …, 2018 - nature.com
It is widely assumed that cells must be physically isolated to study their molecular profiles.
However, intact tissue samples naturally exhibit variation in cellular composition, which …

A heritable iron memory enables decision-making in Escherichia coli

S Bhattacharyya, N Bhattarai… - Proceedings of the …, 2023 - National Acad Sciences
The importance of memory in bacterial decision-making is relatively unexplored. We show
here that a prior experience of swarming is remembered when Escherichia coli encounters a …

Haploinsufficiency of the intellectual disability gene SETD5 disturbs developmental gene expression and cognition

E Deliu, N Arecco, J Morandell, CP Dotter… - Nature …, 2018 - nature.com
SETD5 gene mutations have been identified as a frequent cause of idiopathic intellectual
disability. Here we show that Setd5-haploinsufficient mice present developmental defects …

How data analysis affects power, reproducibility and biological insight of RNA-seq studies in complex datasets

L Peixoto, D Risso, SG Poplawski… - Nucleic acids …, 2015 - academic.oup.com
The sequencing of the full transcriptome (RNA-seq) has become the preferred choice for the
measurement of genome-wide gene expression. Despite its widespread use, challenges …

Late-life environmental enrichment induces acetylation events and nuclear factor κB-dependent regulations in the hippocampus of aged rats showing improved …

R Neidl, A Schneider, O Bousiges… - Journal of …, 2016 - Soc Neuroscience
Aging weakens memory functions. Exposing healthy rodents or pathological rodent models
to environmental enrichment (EE) housing improves their cognitive functions by changing …

Mapping the spatial transcriptomic signature of the hippocampus during memory consolidation

Y Vanrobaeys, U Mukherjee, L Langmack… - Nature …, 2023 - nature.com
Memory consolidation involves discrete patterns of transcriptional events in the
hippocampus. Despite the emergence of single-cell transcriptomic profiling techniques …