Imaging live-cell dynamics and structure at the single-molecule level

Z Liu, LD Lavis, E Betzig - Molecular cell, 2015 - cell.com
Observation of molecular processes inside living cells is fundamental to a quantitative
understanding of how biological systems function. Specifically, decoding the complex …

Effects of molecular crowding on the structures, interactions, and functions of nucleic acids

S Nakano, D Miyoshi, N Sugimoto - Chemical reviews, 2014 - ACS Publications
Nucleic acids are excellent at recognizing complementary sequences through the formation
of Watson− Crick base pairs. Since the base pairing enables the highly selective …

Anomalous diffusion models and their properties: non-stationarity, non-ergodicity, and ageing at the centenary of single particle tracking

R Metzler, JH Jeon, AG Cherstvy… - Physical Chemistry …, 2014 - pubs.rsc.org
Modern microscopic techniques following the stochastic motion of labelled tracer particles
have uncovered significant deviations from the laws of Brownian motion in a variety of …

[HTML][HTML] Breaking the diffraction barrier: super-resolution imaging of cells

B Huang, H Babcock, X Zhuang - Cell, 2010 - cell.com
Anyone who has used a light microscope has wished that its resolution could be a little
better. Now, after centuries of gradual improvements, fluorescence microscopy has made a …

Green fluorescent protein as a marker for gene expression

M Chalfie, Y Tu, G Euskirchen, WW Ward, DC Prasher - Science, 1994 - science.org
A complementary DNA for the Aequorea victoria green fluorescent protein (GFP) produces a
fluorescent product when expressed in prokaryotic (Escherichia coli) or eukaryotic …

CHARMM: the biomolecular simulation program

BR Brooks, CL Brooks III… - Journal of …, 2009 - Wiley Online Library
Abstract CHARMM (Chemistry at HARvard Molecular Mechanics) is a highly versatile and
widely used molecular simulation program. It has been developed over the last three …

Single-molecule imaging of transcription factor binding to DNA in live mammalian cells

JCM Gebhardt, DM Suter, R Roy, ZW Zhao… - Nature …, 2013 - nature.com
Imaging single fluorescent proteins in living mammalian cells is challenged by out-of-focus
fluorescence excitation. To reduce out-of-focus fluorescence we developed reflected light …

Graphene oxide–silver nanocomposite as a highly effective antibacterial agent with species-specific mechanisms

J Tang, Q Chen, L Xu, S Zhang, L Feng… - … applied materials & …, 2013 - ACS Publications
Recently, graphene oxide (GO) based nanocomposites have raised significant interests in
many different areas, one of which being antibacterial agents where sliver nanoparticle …

Ultra-stable organic fluorophores for single-molecule research

Q Zheng, MF Juette, S Jockusch… - Chemical Society …, 2014 - pubs.rsc.org
Fluorescence provides a mechanism for achieving contrast in biological imaging that
enables investigations of molecular structure, dynamics, and function at high spatial and …

A single peptide-major histocompatibility complex ligand triggers digital cytokine secretion in CD4+ T cells

J Huang, M Brameshuber, X Zeng, J Xie, Q Li, Y Chien… - Immunity, 2013 - cell.com
We have developed a single-molecule imaging technique that uses quantum-dot-labeled
peptide-major histocompatibility complex (pMHC) ligands to study CD4+ T cell functional …